Gene Spea_3692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3692 
Symbol 
ID5664077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp4492257 
End bp4492913 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content51% 
IMG OID641238352 
Productpentapeptide repeat-containing protein 
Protein accessionYP_001503538 
Protein GI157963504 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.413415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCCG TCGATCAAAT CTTTAATGAT GAAGACTTTA GCGATCAAGA CTTGCAAGAT 
GCTCGCTTCG AGCGCTGCAG CTTCTACCAC TGCCGCTTTA ACCATGCCGA TCTTACCGAC 
GCAGAGTTTA TTCAGTGTAA ATTTATCGTA CCCGGTGAAG ATGAGGGCTG TGACTTTAGC 
TACGCCACCT TAACCAGTGC TAGCTTTAAG CACTGTAACT TGAGTATGGC GCTGTTTAAA 
GGCGCACGCT GTTATGGCCT TGAGATGCGT GAATGTAACT TGCAAGGCAG TGATTTTAGC 
CGCGCAAGCT TTGCCAATTA CATTACCCCT AAGAGTTATT TCTGCTCGGC ATACATCACC 
GCCTGTAACT TGGCTTATGC CGACTTGAGC GAGCTGTTAT TAGAGGAGTG CGAGCTGTTC 
GATAATCGCT GGCGCGGCGC TAACCTGACT GGTGCGTCGA TGAAAGGCAG CGATCTAAGC 
GGCGGTGAAT TCTCTCCCGA GCAGTGGGGT AGCTTTGAGC TTAAGGGCGC TAACCTGACT 
CGTATCGAGC TCGATGGTTT AGATCCACGC GTGGTGGAGC TCGATGGTGT GATGATCAAT 
CAGTGGCAGC AAGAGCAGTT GCTGGCGCCG CTAGGGCTGA TAGTGACACC TGATTAA
 
Protein sequence
MHAVDQIFND EDFSDQDLQD ARFERCSFYH CRFNHADLTD AEFIQCKFIV PGEDEGCDFS 
YATLTSASFK HCNLSMALFK GARCYGLEMR ECNLQGSDFS RASFANYITP KSYFCSAYIT 
ACNLAYADLS ELLLEECELF DNRWRGANLT GASMKGSDLS GGEFSPEQWG SFELKGANLT 
RIELDGLDPR VVELDGVMIN QWQQEQLLAP LGLIVTPD