| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3664 |
|---|
| Symbol | |
|---|
| ID | 5664049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 4457438 |
|---|
| End bp | 4460005 |
|---|
| Gene Length | 2568 bp |
|---|
| Protein Length | 855 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641238324 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001503510 |
|---|
| Protein GI | 157963476 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA CACTAATAGC AGTAGCAATA ATATCATTAG TCGCCTGTGG TGGCGGTGAT
GAAGCTACTC AAGCGCAACC CAATACCGCT CCGAAAATGT TGATATCAAA TGCTATAGCT
CATGAGATGG TATTAGGCCA AGAAAATAGC GCATTGCCGT TAGCTACATA CTTCAGTGAT
GCTGATGGTG ATGTGTTGAG TTACAAGCTG TTGAGTACGG AGTTAGATGT GGTGATCAGC
GCTTCATCAC TGACTTTCGG TTCGGCTATG ACAGAGGGCG TCTATGATGT CCAAGTCATA
GCGCTTGATG ATAAGGGCGC ACAGTCTCAG CCTCTTACTA TTAAGTTGAA TGTGGTCGAT
CCCGCCATCC CCGATTTGAC CGTTAACGGT GCCAATGAGG CTTATATTGC TAATGAGGTT
GTGACCCTAG CAGTTAAGTT GGACGAAGAA CCTGCTTTTC CGATTTTGTA CTCTTGGGGG
CAAGAGACGG GGCGAACTGT TGAGAGCATC GATACTGAAT CGGAGACATT AGAGTTTAGT
GTACCTGGCG ATATTAGTGC GCAAACATTA AGTTTTAAGC TGGTTCTAGA GTCAGATTAT
GCCAGTCGCT CTGAGATTGT TAATCTTGCC GTTTACTCTC CATTGGCAAT AGATACGGTA
GATACAGCGT TGACCGCATT TGGTGAGCGA GTCAGATTAG TGACCTCTGG TGGTAACGGT
AACGACCTGA GTTTTACTAG CTCCGATGAG GCGATAGCCA AAGTCGATGA TAATGGTGAA
GTTACCCCTT TGAATGCTGG CTCTTTTACT ATTCGCGTTA TTCAGGAAGG CTTGGATTTG
ATCCCAGCCC TTGATGCTGA GGTGGATTTA GTTGTTTCAA ATCCTGAGGG CCTTAGGGTT
TATTTAGATG TTCCTGTGCA GCTCACCAAT GGCGTGAGTG CCTTTTCGGC GCCTAATGTC
CCAGCGATTG GGCAAGGCAA AGACACCAGT TTTACTACTT TTGCCAAAGT GAGCTTTGAT
GATAAAGAGC AGATCACTGA ACTTGAAAAT ATTGACGGAG TGTGGAGTGG CGTTTTGTTG
CAAGTTCCCG CCGATAAGTT GCTGATATTA ACAACTCATA GTGTTGATTT TGCAGGGCAA
AAAACATATC AGCAATCTAA AGAGTTCATC CTAACGGAAG AGGGGGAACT GACAGTACAA
GTTCAGCAAG TTGCCGTAGA GGCTGAAAAC ATAGTGTCAA CGCCAATCGA CCGATGTGAA
AACTATGTGG ATGATAAGGG AAATATATAC CCGATCTCTA TGCAGGAAAG TATCGATGGT
TTTGGGGCAA AACTCCAAAT CTGGGGCTAT GAAATTGAGC AGCAATTCAT TCGCCATCAC
GATTGCCAAC CAGCTTATAT TCAATACTTT ATTTCCGGAA ATTTATCCGA GGAAATAAAT
TACTTACATG GTGTTAATCA CAATAGTGGG CAGATCTCTT ATACCCGTTA TTATGATGCG
GTTGATGCCT ATGGCGATCC CATTAAGCAC ATTGAGTCCC GTGAAGATGA GAGTGGTCAC
AGCCTAGTAT TAGATGATCA ACCATCAGGC TATGAGTATT ACCCTAGCGG TAGGATCCGA
GTGAAACAAT GGATAGCTGG CGAAGCTTCG TCTTTCATTC GTGCATTTGG TCCAGATTTA
ATTGTTTATA CGGATGATGA AACATCAACG TACAGCAGTA TGACTTGGCA TGATGCTGCA
CAGACCCGTG AAAAAGAGAA GGTATTTAAT CCAGATGGTA GTCCGCAATG GTGCAGTTAT
TTAGATCCAA ATAGTAAACA AGATGTCCTT TACAGTAACT GCGAGCTTTA TAATGGATCT
GGAGATATTA AGACCGAGGT CGATTTAGAT AGGCAATATG CTATCGATAC CAATGATCAA
CCTATCATTG AGCCAATTAA CGAGTGCCAA CACTTTATTG ATGATGACGG TACGGTTTAC
CCCATTCAGG AGCAAACGGA CAGCACAGGT TATGTTACAA CGGGCTATTT TAAGAGTGGC
CAGTATACCT ATCATAACCA ATGCAAGCCT GCTATGACTC GGTTCTATTC ATCAGGCAAT
CCCGAGCATG CATGGACATT CCGCAAAGGG GTCAATACTC ACCCTGATGG CTATACCTCG
TTTGCTTATT ACGACCTTTT AGACGGGGAG GGTAAGCCAA TACTTGAGAT GGAATCCAAG
ATTGAGAATG AGCTGTATGT CATACAGGAA GACGCGCCCT CTGTGGTTAA GTATTTCACT
AATGGTGATA TTCAATACCA AGCTTGGATG CAAACCTATG ACTTAGGTGA CTGGGTTTAT
GGCCGCGATG CTGGGCCTGA TGTAGTCACT TATGGTTATG GTAGCAATGG TTACCAGCAA
AAAAGTGTTT ATTGGTATAG TAAGGCTGGA GATAGGCTGA AGCGTAAAGA TTTCGACTCG
CAAGGTGAGC TTGATGTTTG TCATTACTAC CAGATTGATC AATTGGTGCA GTCAGATGAC
GCATGTTTGA ATGAATCAGA ATTAGACATC GAGTTCGAAA TTCAATAA
|
|---|
| Protein sequence | MKKTLIAVAI ISLVACGGGD EATQAQPNTA PKMLISNAIA HEMVLGQENS ALPLATYFSD
ADGDVLSYKL LSTELDVVIS ASSLTFGSAM TEGVYDVQVI ALDDKGAQSQ PLTIKLNVVD
PAIPDLTVNG ANEAYIANEV VTLAVKLDEE PAFPILYSWG QETGRTVESI DTESETLEFS
VPGDISAQTL SFKLVLESDY ASRSEIVNLA VYSPLAIDTV DTALTAFGER VRLVTSGGNG
NDLSFTSSDE AIAKVDDNGE VTPLNAGSFT IRVIQEGLDL IPALDAEVDL VVSNPEGLRV
YLDVPVQLTN GVSAFSAPNV PAIGQGKDTS FTTFAKVSFD DKEQITELEN IDGVWSGVLL
QVPADKLLIL TTHSVDFAGQ KTYQQSKEFI LTEEGELTVQ VQQVAVEAEN IVSTPIDRCE
NYVDDKGNIY PISMQESIDG FGAKLQIWGY EIEQQFIRHH DCQPAYIQYF ISGNLSEEIN
YLHGVNHNSG QISYTRYYDA VDAYGDPIKH IESREDESGH SLVLDDQPSG YEYYPSGRIR
VKQWIAGEAS SFIRAFGPDL IVYTDDETST YSSMTWHDAA QTREKEKVFN PDGSPQWCSY
LDPNSKQDVL YSNCELYNGS GDIKTEVDLD RQYAIDTNDQ PIIEPINECQ HFIDDDGTVY
PIQEQTDSTG YVTTGYFKSG QYTYHNQCKP AMTRFYSSGN PEHAWTFRKG VNTHPDGYTS
FAYYDLLDGE GKPILEMESK IENELYVIQE DAPSVVKYFT NGDIQYQAWM QTYDLGDWVY
GRDAGPDVVT YGYGSNGYQQ KSVYWYSKAG DRLKRKDFDS QGELDVCHYY QIDQLVQSDD
ACLNESELDI EFEIQ
|
|---|
| |