Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3648 |
Symbol | |
ID | 5664033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4435713 |
End bp | 4437098 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641238308 |
Product | aminotransferase class V |
Protein accession | YP_001503494 |
Protein GI | 157963460 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCACA AACCTGAAGC CAACTTGGCT AACGCTGGAC GTCGAGGCTT TTTAAAGACA ACCACTGGCG TTGCACTTGC TGCTGTCGGA ACAAGTTTAC TGCCAGCCAC TGCACATGCG AGCAGTGACA ATCATATTGA GCCTTTCCAT GGTCATGGCT CTGGCCAGGG CTTCTGGAAC AAGGTTCGCA ATGAATTTAT CCTAAACAAG CGCACTACCT ACATGAACAT TGGTACTGCT GGCACCATGC CAAAGCGTGT CTTAAAAGAC TATAACCGCA CCAATGAACA GATCTCTATT AATCCTTGGA ACAGCAATAT TCCAACTTTA GATTATGCCA AGCAGATAGC TCCAAGCTTC GGTGCCGATG AGCACGAATT AGTGCTATGT CGTAACACTA CCGATGGCTT ATGTACCATT ATCAACGGCC TACAGTTTGA GTACGGCGAC ATCATCTTAA CCACTAACCA CGAACACCAC GGTGTCACTA CACCACTAAA GCATGTAGCA CAGCGCTATG GCGCCGAAGT GATCGAGTTG GCTCTACCTG TTTACACGCC AAATAATGAA GTAAGCAGTG ATGATTTCGT GCAGGTCTTT AACGATGCGG TAAGCCAATA TGGCAATCGC GTACGCTTGA TGGTGTTCTC TCACGTGACG TTCACCACTG GTACCACGCT TCCAGCTAAG CGTATCTGCC AAGAGGTCGC CATTCCAAAT GGTATCATTA CCTTAGTCGA TGGTGCGCAT ACTCCCGGTA TGTTCAACCT AGATTTCCAT GATATCGATT GTGACTTCTA CTCAGGTGCA GGCCACAAGT GGCAATGTGG TCCTGGTGCT ACAGGCTTCC TATACGTACG TGATAACGCT AATCGTCTAT TCGAATTCTG GAGCGATCGC GAAACACCGC TATGGTTTAT CAACACCTCA TCATCGGCTG CAGAAGTACA GACTAAGCTG CAATCTGTTG GCCAGGATAA CTACCCAGCC AAACGCGCTC TAGCAGATGC TTGCGCACTT TGGGATGAGA TTGGTCGTGA TGCAATTGAA GAGCGCATTC TAGATTTAAG CGCACTATGT AAGAAACAAC TAGCCAAGAA ATTCCCTGAG GCGATGATCT TTGCTCCTAA TATTCGTGAG CTATCTAGCG GCCTAACTAC CTTCAACCCA TTCGACGATC TAAATGATGG CGAGCTACTG ACAGAGTTCC GCGACCGTTT ACATGAAGAG TATGGCTACA TAGTTAGAAC CACCTCTTTC TACTTAGATC AGTACGATAC GGTTAAGACT TACTCTCTAC GCATTTCGAC TCACCTTTTC CATGATGAAG ATGATGTTAA GGGTCTAGTC AAAGCGATGA AGCAACTGCA TCGTGAAATG AGATAA
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Protein sequence | MNHKPEANLA NAGRRGFLKT TTGVALAAVG TSLLPATAHA SSDNHIEPFH GHGSGQGFWN KVRNEFILNK RTTYMNIGTA GTMPKRVLKD YNRTNEQISI NPWNSNIPTL DYAKQIAPSF GADEHELVLC RNTTDGLCTI INGLQFEYGD IILTTNHEHH GVTTPLKHVA QRYGAEVIEL ALPVYTPNNE VSSDDFVQVF NDAVSQYGNR VRLMVFSHVT FTTGTTLPAK RICQEVAIPN GIITLVDGAH TPGMFNLDFH DIDCDFYSGA GHKWQCGPGA TGFLYVRDNA NRLFEFWSDR ETPLWFINTS SSAAEVQTKL QSVGQDNYPA KRALADACAL WDEIGRDAIE ERILDLSALC KKQLAKKFPE AMIFAPNIRE LSSGLTTFNP FDDLNDGELL TEFRDRLHEE YGYIVRTTSF YLDQYDTVKT YSLRISTHLF HDEDDVKGLV KAMKQLHREM R
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