Gene Spea_3646 details

Gene Information

• Locus tag: Spea_3646
• ID: 5664031
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 4434120
• End bp: 4434788
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641238306
• Product: hypothetical protein
• Protein accession: YP_001503492
• Protein GI: 157963458
• COG category: [S] Function unknown
• COG ID: [COG3619] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATTTCTA GACTTCCTAA ATGGGTTGAG TATGGCGCGT TTATTCTGGC TTTTACGGCG 
GGTAGCGTGA ATGCAATCGG CTTGCTAGGC TTTGAGCATC AATCAGTCTC TCACCTCTCA 
GGCACGGCAA CCTTAGTCGG CACTCAGCTT TTAAGTTCCT CACCCACTGT TCTGTTTCAT 
CTTATGGGGA TCTTAGTCAG CTTTATGTTT GGTGCCACGA TTTCTGGCGC CTTTCTATCA 
GGCAGTAGCC TCAAGCTAGG GCGCCATTAC GACACCTTGC TGCTTATCGA GGCGGGCTTG 
TTGCTGTTTG CCATCGATCT GCTGCAAGAT GGCACCTACT ATGGTCACTA CATGGCATCG 
GCGGCTTGCG GCTTGCAAAA CGCACTGGCA ACCACCTATA GCGGCGCTAT CGTACGTACT 
ACCCACGTTA CCGGCATTTT CACTGACTTA GGTATCATGT TAGGTGGTAT CTTGAAGGGG 
GAAAAATTTG ATAAGCGTAA GGCCGTACTG TTTATGCTTA TCATCGCAGG TTTTATCTCT 
GGCGGCGCCT TAGGTGCTTA CCTGTTTGCT AAGCTGCAAT TCTTTGCCCT ACTCGCCCCC 
GCCGCCATCT GTATAGCACT GGCGATGAGC TACCGATTTT ATAAAGCATT AAATCGCCCG 
AAGCCCTAA 

 

Protein sequence

MISRLPKWVE YGAFILAFTA GSVNAIGLLG FEHQSVSHLS GTATLVGTQL LSSSPTVLFH 
LMGILVSFMF GATISGAFLS GSSLKLGRHY DTLLLIEAGL LLFAIDLLQD GTYYGHYMAS 
AACGLQNALA TTYSGAIVRT THVTGIFTDL GIMLGGILKG EKFDKRKAVL FMLIIAGFIS 
GGALGAYLFA KLQFFALLAP AAICIALAMS YRFYKALNRP KP