Gene Spea_3645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3645 
Symbol 
ID5664030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp4433525 
End bp4433935 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content47% 
IMG OID641238305 
ProductCopG family transcriptional regulator 
Protein accessionYP_001503491 
Protein GI157963457 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAACG ACACGATTCG CTTCACTGTT TCTATGCCAA AGTCTCAATT TGATGAGATT 
GAACAAGATC TATTACAACG AGGCTATCAA TCCCGCTCTG AGTATATTCG CGACCTGTTC 
AGAGACCGCT TAGTCGATAA GCAATGGAAC GAGAGTAAAG AGGATGTGGT CGGGGTACTG 
ACACTCATCT TCGATCACCA TCAACGCGGC CTGAGTGAGA AACTGATCGA TATCCAGCAT 
AACCATTTAG TACATGTCTT GTGTAGCACC CATGTACATG TCGACCACCA TAACTGCCTA 
GAGACCATTA TCATCAAGGG GCAAGCGGTC GAGCTTAACG CCATTGTGAA TCGAATAGCG 
GCACTGAAAG GAGTCAAGGT CGCACGCTTA AGCCGCGCGG GAGTGGTATA G
 
Protein sequence
MSNDTIRFTV SMPKSQFDEI EQDLLQRGYQ SRSEYIRDLF RDRLVDKQWN ESKEDVVGVL 
TLIFDHHQRG LSEKLIDIQH NHLVHVLCST HVHVDHHNCL ETIIIKGQAV ELNAIVNRIA 
ALKGVKVARL SRAGVV