Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3624 |
Symbol | |
ID | 5664009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4413299 |
End bp | 4413973 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641238284 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001503470 |
Protein GI | 157963436 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0928297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTTA AACCTAGTTC TATTCTTGCT GGTGGCCTTA TCGCCGCCAT GTTGGTGTCT GGTTGCCAGA CAACCAATCC TTATACCAAC GAATCTCAAA ATGGCAAAGC GACTAACGGT GCCTTGATTG GAGCAATCGC TGGCGCGGCG ATTGGCGTTG CGTCATCGAG TAAAAGTGAC CGCGCTAAAG GCGCCTTGAT CGGTGCTGCA TCTGGTGCGG CATTAGGTGG TGGTATTGGC TATTACATGG ACGTGCAGGA AGCCGAGCTT CGTAAGCAGC TGCAATCATC AGGTGTGAGT GTGACTCGCA GTGGCGACAA TATTATTTTG AACATGCCAA ATGATGTGAC TTTTGGTGTG GATCAAACCG ACCTGAGTCA GCGTGCTAAG CAAGTGTTAA ACAGTGTGGT ACTGGTAGCG CTTGAATATG ATGAGACTAA GCTAAACGTG ATGGGTCATA CCGATAGCTC AGGTGCGGAA TCGTATAACC TAAGGCTGTC GCAAGTACGT GCCAGTGAAG TGGCAAACTA CCTAACCCGC CAGAAGGTAC CAGCTCAGCG TGTGGCTTCT CATGGTATGG GCGAGTCCAA GCCGATCGCC TCCAATGAAA CCAAGCAGGG CCGAGCCGAA AATCGTCGTG TAGAGATTAT CTTAAGCCCA ATGCCAAACG CTTAA
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Protein sequence | MSVKPSSILA GGLIAAMLVS GCQTTNPYTN ESQNGKATNG ALIGAIAGAA IGVASSSKSD RAKGALIGAA SGAALGGGIG YYMDVQEAEL RKQLQSSGVS VTRSGDNIIL NMPNDVTFGV DQTDLSQRAK QVLNSVVLVA LEYDETKLNV MGHTDSSGAE SYNLRLSQVR ASEVANYLTR QKVPAQRVAS HGMGESKPIA SNETKQGRAE NRRVEIILSP MPNA
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