Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3615 |
Symbol | |
ID | 5664001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4406270 |
End bp | 4407001 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641238277 |
Product | ABC transporter related |
Protein accession | YP_001503463 |
Protein GI | 157963429 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0117606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAA TTACCTTAAA AGCGGCTAAT CTTGCTAAAA GCTATAAAAA CCGTGCCGTC GTACAAGATG TCAGTCTCAC CGTAAAAACG GGGCAAATTG TGGGCCTACT CGGCCCTAAC GGGGCCGGCA AAACAACAAC CTTCTACATG GTGGTCGGCC TAGTACAGAG CGATAAAGGC AAGATCTTTA TCGATGACGA TGATCTCACC CTAGATCCTA TGCACCTGCG TGCTCGTAAA GGGATTGGCT ATCTGCCCCA AGAAGCCAGC ATTTTTAGAA AGCTTTCGGT GCGTGACAAT ATCATGGCAG TGTTACAGAC CCGCCATGAT ATCAATAACG AGCAACGTGA AGAGCAGCTC GAACATTTAC TCGAAGAGTT CCACATCACT CACATTCGCG ATAGCCAAGG CATGGCATTA TCGGGCGGTG AACGACGTCG AGTAGAAATT GCCCGAGCAT TGGCCGCTAA TCCAAAGTTT ATTTTATTGG ATGAGCCATT TGCCGGTGTC GACCCAATTT CAGTTATCGA TATCAAAAAG ATTATTGAGC AACTCAAAAG CCGCGGCCTA GGTGTACTGA TCACTGACCA CAATGTTCGA GAAACCTTGG ACGTTTGTGA ACACGCTTAC ATCGTGAGTC ACGGAAACCT CATTGCCGAA GGCACACCTG CCGAAATCTT GGACAACCAA CAGGTTCGAG CAGTGTACTT AGGTGAGCAA TTCAGGCTAT AG
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Protein sequence | MTQITLKAAN LAKSYKNRAV VQDVSLTVKT GQIVGLLGPN GAGKTTTFYM VVGLVQSDKG KIFIDDDDLT LDPMHLRARK GIGYLPQEAS IFRKLSVRDN IMAVLQTRHD INNEQREEQL EHLLEEFHIT HIRDSQGMAL SGGERRRVEI ARALAANPKF ILLDEPFAGV DPISVIDIKK IIEQLKSRGL GVLITDHNVR ETLDVCEHAY IVSHGNLIAE GTPAEILDNQ QVRAVYLGEQ FRL
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