Gene Spea_3614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3614 
Symbol 
ID5664000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4405734 
End bp4406273 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content46% 
IMG OID641238276 
Productcell envelope biogenesis YhbN 
Protein accessionYP_001503462 
Protein GI157963428 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0599225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACA ATAAATCTAT CCTTGCTGGC CTTTTTTGCC TGCTAAGTTT CAGCTCTACA 
GCTAAAGTCG ATGATCTACT GCAAGAAGTG AAAATTGCAG CGGCAAGCCA AGAAGCCGAC
ATTAAGAATA ATCAGGTTAT CTTTTTTGGG CCTGTTGAAG TGACTCAGGG CTCTATTAAG
ATGAATGCCG ATGAGCTACG TGTATTTTCA AAAGAAGATA AGAGCGGTAA AACGCTAGTG
GCTACAGGTA ATCCAGCCAC CTACACCCAA ATGATGGAAG ATGGTCGCCC AGCGACCGCT
AGCGCGAAAG AGATCCGCTA CGAACTTGCG ACTCGCACAT TGACCTTAGT CGGTGAAGCG
ACCCTAGCGC AAGACGGCAG CCAAGTCACT GGTAACCGCA TTAAGTACAA CATTAGTCTA
CAACAGCTTA TTGCTGAAAG TACTGGCAAG GGCGATGACA GAGTCATCAC CATTATTCAG
CCTGAAACCT ACCAGGAAGA GAAGCCTGAC ACGCCAGTGA ACAAGCAGGA ACAGCAATGA
 
Protein sequence
MKYNKSILAG LFCLLSFSST AKVDDLLQEV KIAAASQEAD IKNNQVIFFG PVEVTQGSIK 
MNADELRVFS KEDKSGKTLV ATGNPATYTQ MMEDGRPATA SAKEIRYELA TRTLTLVGEA
TLAQDGSQVT GNRIKYNISL QQLIAESTGK GDDRVITIIQ PETYQEEKPD TPVNKQEQQ