Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3614 |
Symbol | |
ID | 5664000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4405734 |
End bp | 4406273 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641238276 |
Product | cell envelope biogenesis YhbN |
Protein accession | YP_001503462 |
Protein GI | 157963428 |
COG category | [S] Function unknown |
COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0599225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATACA ATAAATCTAT CCTTGCTGGC CTTTTTTGCC TGCTAAGTTT CAGCTCTACA GCTAAAGTCG ATGATCTACT GCAAGAAGTG AAAATTGCAG CGGCAAGCCA AGAAGCCGAC ATTAAGAATA ATCAGGTTAT CTTTTTTGGG CCTGTTGAAG TGACTCAGGG CTCTATTAAG ATGAATGCCG ATGAGCTACG TGTATTTTCA AAAGAAGATA AGAGCGGTAA AACGCTAGTG GCTACAGGTA ATCCAGCCAC CTACACCCAA ATGATGGAAG ATGGTCGCCC AGCGACCGCT AGCGCGAAAG AGATCCGCTA CGAACTTGCG ACTCGCACAT TGACCTTAGT CGGTGAAGCG ACCCTAGCGC AAGACGGCAG CCAAGTCACT GGTAACCGCA TTAAGTACAA CATTAGTCTA CAACAGCTTA TTGCTGAAAG TACTGGCAAG GGCGATGACA GAGTCATCAC CATTATTCAG CCTGAAACCT ACCAGGAAGA GAAGCCTGAC ACGCCAGTGA ACAAGCAGGA ACAGCAATGA
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Protein sequence | MKYNKSILAG LFCLLSFSST AKVDDLLQEV KIAAASQEAD IKNNQVIFFG PVEVTQGSIK MNADELRVFS KEDKSGKTLV ATGNPATYTQ MMEDGRPATA SAKEIRYELA TRTLTLVGEA TLAQDGSQVT GNRIKYNISL QQLIAESTGK GDDRVITIIQ PETYQEEKPD TPVNKQEQQ
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