| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3610 |
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| Symbol | |
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| ID | 5663996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4402573 |
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| End bp | 4403532 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641238272 |
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| Product | CaCA family Na(+)/Ca(+) antiporter |
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| Protein accession | YP_001503458 |
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| Protein GI | 157963424 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTTA ATATTTTTAT GTTAGTGGCA GGCTTAGGGG CTCTCGTTTG GAGCGCTGAT
AAGTTTGTTT ACGGTGCAGC CGCTTTTGCT CGTAACCTTG GCTTACCACC CATGTTAATC
GGTTTAACGA TTGTCGCCAT GGGTAGCTCT GCTCCCGAGA TGTTTGTTGC GGCCACAGCA
TCCCTCGAAG GCATGACCGA TACCGCAATC GGCAATGTGC TGGGCTCTAA CATAGCAAAC
ATCACATTAA TCTTAGGTAT TACAGCCTTA CTCGGAGCGA TTTCTGTCAG TTCACAGACG
CTGAAACGTG AAATTCCAAT GATGCTGGTA GCCACCGTAA TTGTGGGTTA CTTCCTACAT
GATGGTTTCT TAACGCGTAT CGAAGGTGTC AGCTTATTAG TGATGTTCAT TGGCTTAATG
GGCTATCTGA TTTGGCACGG ACTTCATAGT AAAAACCGTG ACGCTTTAGC CGTAGATGCC
GAAAATGAGA TCCCTGCCGA TGTGCCTACA GCTAAAGCGG TTTTATGGCT TGTAGTCGGC
ATGGTATTGT TACCATTATC GGCAGATTGG ATGGTCCAAG GCGCAGTAGG GATAGCAAAG
GCGTATCACC TATCGGATCT AGTGATCGGC CTAACTATTA TTGCCGTGGG TACCAGCTTA
CCAGAGCTTG CCGCTTGTGT TGCCGGAGTC TTAAAAAAAG AAGACGACCT TGCGATTGGT
AACATAGTTG GTTCAAACTT ATTCAATATT TTAGCGGTAC TTGCGATACC TGGCATCATA
GCGCCAGGCG CTGTCGATGC GGCGGCGAGT ACTCGAGACT TTTATATGGT GCTTGCCACG
AGCAGTGCAC TGGCAATACT TATCTTATTA TCAGGCCGTG CTAGACAGTT AAAACCCTGG
CATGGCGTAG TATTACTTAT TACATTTATC GCATACCAAG CACTACTTTT CCTATCTTAG
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| Protein sequence | MLFNIFMLVA GLGALVWSAD KFVYGAAAFA RNLGLPPMLI GLTIVAMGSS APEMFVAATA
SLEGMTDTAI GNVLGSNIAN ITLILGITAL LGAISVSSQT LKREIPMMLV ATVIVGYFLH
DGFLTRIEGV SLLVMFIGLM GYLIWHGLHS KNRDALAVDA ENEIPADVPT AKAVLWLVVG
MVLLPLSADW MVQGAVGIAK AYHLSDLVIG LTIIAVGTSL PELAACVAGV LKKEDDLAIG
NIVGSNLFNI LAVLAIPGII APGAVDAAAS TRDFYMVLAT SSALAILILL SGRARQLKPW
HGVVLLITFI AYQALLFLS
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