| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3601 |
|---|
| Symbol | |
|---|
| ID | 5663987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 4395511 |
|---|
| End bp | 4396185 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641238263 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001503449 |
|---|
| Protein GI | 157963415 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACAG TTTTGCTAGC TGAGGATGAT AGAGAGCTTA GCCAAAATAT GGTTGAAATT
CTTGAACTTG AGGGTTTTAG TGTTACCGCG GTTGAAAGTG CAGAGGCTGC GATTAGAGCG
AGTGAGAAGC AACATTTTGA TATCGCACTG ATGGACTTGC TAATGGCGGG CATGACAGGG
GTTGAAGCTA TCTCGAACCT AAGACAAAAC CAGCCATTAA TTGCCGTCAT TATTATCACG
GCTTATGCAA CCGTCGATAC CGCCGTCGAT GCGATGAAAA AAGGTGCCGA CAGTGTGATG
ACCAAGCCGT TTAAGAGTAG CGAGCTTATC GTCACCATAA GGCGTAGCCT CGCGGAAAAA
CAGCTGTTCA AGAGTCGTAT CGATCTCGAT CCTGACCTTG TCTACAGCGC ACTGGCGAAT
CCTTATCGGC GTAAGGCGCT TACAGTGCTG GCAATCCATA AGGCTGTTAA GTTTATGGAC
TTATGCCGCC TAGTTGAAAT AGAGGATCAT ACAAAGTTTA ATTTTCATCT GCGTCAGTTA
AAAAAGGCGG GGCTTGTGAT GCAAAATGAG AACAAGCTCT ACATTTTGAC AAATACAGGC
CAATTCGTGT TAACAAATCA TAACATTTCG CAGGAGGGAA TTTCCTTTTT AAACAGTGTT
TTAGTTGGTA GTTGA
|
|---|
| Protein sequence | MVTVLLAEDD RELSQNMVEI LELEGFSVTA VESAEAAIRA SEKQHFDIAL MDLLMAGMTG
VEAISNLRQN QPLIAVIIIT AYATVDTAVD AMKKGADSVM TKPFKSSELI VTIRRSLAEK
QLFKSRIDLD PDLVYSALAN PYRRKALTVL AIHKAVKFMD LCRLVEIEDH TKFNFHLRQL
KKAGLVMQNE NKLYILTNTG QFVLTNHNIS QEGISFLNSV LVGS
|
|---|
| |