Gene Spea_3588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3588 
Symbol 
ID5663974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4379122 
End bp4381209 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content46% 
IMG OID641238250 
Productprolyl oligopeptidase 
Protein accessionYP_001503436 
Protein GI157963402 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1505] Serine proteases of the peptidase family S9A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.331687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAATC AAATTTTATC TTTGTGCGTA CTGGGTGCAA TTGCTGCCGT ACCCGCTCAC 
GCAGAGGATG ATAACTACCT CTGGCTAGAA GATGTTGAAG GCGCAAAGCC GATGGAATGG
GTGAAACAGC AAAATGCTAT TTCGGCCAAA GAGATTAAGG CATTCGAAGG CTTCGATAAC
TTAGTGAGTA ATAGCCTGGC CATCCTAAAC GACAAAGAGC GCATCCCATA CGCCAGTCGT
ATTGGCGATT ACCTATATAA CTTCTGGAAA GACGAGAACC ACGTTAGAGG GATCTACCGC
AGAACTACCA TGGAGGAGTA TAAGAAGACT TCGCCTAAAT GGGAAACGGT ACTCGATATC
GACAAGCTAG GCAAAGATGA GGGGGTTAAC TGGGTCTATA AGGGCTTTAA CTGTCGTTAC
CCTGAAAATG ATCGTTGCTT TGTCTCTCTT TCACGTGGGG GCGCCGATGC AACTGAGGTG
CGAGAGTTTG ATCTCAATAC GCTCTCCTTT GTGGGGGAAA AACAACAAGC ATTCTTTCTC
GAAGAAGCTA AGTCGAGCCT GAGCTGGATT AATAAGAATA ACGTCTTTGT TGGCACCGAC
TTTGGTGACG ATAGCATGAC GGATTCTGGT TACCCTAAGG TGGTTAAGCT TTGGGAGCGT
GGTACTAAGC TTTCTGAAGC AACAACGGTT TTCAGTGGTG ATAAAGCGTC GGTAGCGGTA
TCAGGCTATG TACTGTTTGA CGGCGATAAT TCCTTGGAGC TAGTGTCAGA GGCGTTGACC
TTCTATACCG CCGAGCATTA TGTTTACCGC GATGGAAAAC TCACCTTATT GCCTCTACCA
AAAGATGCTG AACTTAAAGG CTATTTTAAC GGCCAGCTGT ATATCGAGCT AAAAAGCGAT
CTTAAAACAG GGAGCGAGAG CTTCAAGCAA GGTAGCATTA TCTATGCTCC GGTAGAGACG
CTTATTGAGC AGAAGCCACA ATTTAACGTG TTAGTGGAGC CATCGGAAAC CGCTTCTATC
TCACAAGTTA AATTTACCAA GAGTGCGATT TTCGTTACTT GGTTAGATAA CGTCAAAGGC
AAATTGGTAC GTTACTCTCA AGCAAAAAAC GGTCAGTGGA AAAGCATGCA AGCGCCGTTC
GATGCTAATG GCACCATTAG CGTGTTTGAT GTCGAGCGTG ATAGTGATGA CTTCTTCGTT
AACTATACTA GCTTCTTAGA GCCTTCAAGT TTATATAGCT TTAATGCTGT GACCATGAAA
GCCGAAAAGA TTAAGGGCAT GAAACAGCAG TTCGCTGCCT CAAAGTTTGA AACTAAACAA
TATTTCGCTA CCTCAAAAGA TGGTACTCAG GTGCCCTATT TTGTGGTGAT GGCGAAAGAT
CTTAAACGTG ATGGCAAAAA TCCGACTCTG CTTTATGGAT ATGGTGGTTT TGAAGTTTCT
CTGCGTCCCT CTTATTCGGC AACAATCGGT AAAAATTGGT TGGAGCAAGG CGGTGTTTAT
GTGCTAGCCA ACATTCGTGG TGGAGGCGAA TATGGCCCAG CTTGGCATCA AGCGGCTCTG
AAACAGAATC GTCATAAAGC CTATGAAGAT TTTGAGGCAA TTGCAGAGGA CTTGATAGCT
AAGAAGATTA CCTCGAGTGA GCATCTAGGG ATCCAAGGTG GCAGTAATGG TGGCTTGCTG
ATGGGGGCTG CATTTACTCG TAAACCTGAG CTTTATAGTG CAGTTGTATG CCAGGTACCG
TTACTGGATA TGAAGCGCTA CAACAAGCTG TTGGCTGGAG CGAGCTGGAT GGGGGAGTAC
GGCGATCCGG ATATTCCTGC CCAGTGGGAT TATATTAAGA CATTTTCGCC TTACCATAAC
CTAAAGGCGA ATACAGCTTA CCCGAAGGTG TTTTTCACCA CCTCAACCCG TGATGACAGG
GTTCATCCCG CTCATGCTCG CAAGATGGTG GCTAAGATGG AAGGCATGGG CATTGATGTC
TTGTATTATG AGAATATCGA AGGGGGTCAC GCTGGCGCTG CTGATAATAA TCAGGCGGCG
GAGCTAAAGT CGATGGTATA CGCTTATCTT ATGCAACAAC TAAGGTAA
 
Protein sequence
MRNQILSLCV LGAIAAVPAH AEDDNYLWLE DVEGAKPMEW VKQQNAISAK EIKAFEGFDN 
LVSNSLAILN DKERIPYASR IGDYLYNFWK DENHVRGIYR RTTMEEYKKT SPKWETVLDI
DKLGKDEGVN WVYKGFNCRY PENDRCFVSL SRGGADATEV REFDLNTLSF VGEKQQAFFL
EEAKSSLSWI NKNNVFVGTD FGDDSMTDSG YPKVVKLWER GTKLSEATTV FSGDKASVAV
SGYVLFDGDN SLELVSEALT FYTAEHYVYR DGKLTLLPLP KDAELKGYFN GQLYIELKSD
LKTGSESFKQ GSIIYAPVET LIEQKPQFNV LVEPSETASI SQVKFTKSAI FVTWLDNVKG
KLVRYSQAKN GQWKSMQAPF DANGTISVFD VERDSDDFFV NYTSFLEPSS LYSFNAVTMK
AEKIKGMKQQ FAASKFETKQ YFATSKDGTQ VPYFVVMAKD LKRDGKNPTL LYGYGGFEVS
LRPSYSATIG KNWLEQGGVY VLANIRGGGE YGPAWHQAAL KQNRHKAYED FEAIAEDLIA
KKITSSEHLG IQGGSNGGLL MGAAFTRKPE LYSAVVCQVP LLDMKRYNKL LAGASWMGEY
GDPDIPAQWD YIKTFSPYHN LKANTAYPKV FFTTSTRDDR VHPAHARKMV AKMEGMGIDV
LYYENIEGGH AGAADNNQAA ELKSMVYAYL MQQLR