| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3586 |
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| Symbol | rpsF |
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| ID | 5663972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4377567 |
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| End bp | 4377980 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641238248 |
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| Product | 30S ribosomal protein S6 |
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| Protein accession | YP_001503434 |
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| Protein GI | 157963400 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0940753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTCATT ATGAAATCGT ATTTTTAGTT CACCCTGATC AGAGTGAACA AGTGCCAGGT
ATGATCGAAC GTTACACGGG TATTCTTACC CAAGCTGGCG GTCAAATCCA CCGTTTAGAA
GACTGGGGCC GTCGTCAATT GGCTTACCCA ATCATCGAAT TGCATAAAGC TCACTATGTT
CTTATGAACG TAGAGACTAC TGCAGAAGCG GTTGAAGAAC TTGAAACAGC TTTCCGTTTC
AACGACGCTG TTTTGCGTAG CATGGTTATG CGTACTAAAG CTGCCATCAC TGAAGCATCT
CCAATGGCTA AAGCTAAAGA CGAGCGCGAC ACACGTCGTT CATCTGAAGA GCGTGCACCT
CGTGCAGAAG CTACTGAAGA AGCTGAAGAA AGCGCTGAAA ACACTGCTGA GTAA
|
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| Protein sequence | MRHYEIVFLV HPDQSEQVPG MIERYTGILT QAGGQIHRLE DWGRRQLAYP IIELHKAHYV
LMNVETTAEA VEELETAFRF NDAVLRSMVM RTKAAITEAS PMAKAKDERD TRRSSEERAP
RAEATEEAEE SAENTAE
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