| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3574 |
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| Symbol | |
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| ID | 5663960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4362382 |
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| End bp | 4364142 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641238236 |
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| Product | flavocytochrome c |
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| Protein accession | YP_001503422 |
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| Protein GI | 157963388 |
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| COG category | [C] Energy production and conversion
[S] Function unknown |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
[COG3976] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTCA AATTAAAAAA GTCAGCGCTA GGCGTGGCAA TTGCCTTACC TGTAATATTA
GTTGGTTGTG CAGTAACAAG CGAAATGATC AAATCACAAG GTACGGCTAA AGGTCGACAT
GGTGATATTA CTGTAGAAAC AACGTTCCAG AATGGTCAAA TTACTGCAAT TGATATCGTA
AAACAAAAAG AGAATAAAGT TCTATCCGCA GCCGTTTATA AAGACGTAAA GCAAGCAATC
ATTGATAACA ACAGTGTCAA CGTGGATGGC ATCTCTGGTG CAACGGCCAC TTCTGATGGC
TTCAAGCAGG CGGTTGCTAA GTCGGCTGAG CTTGCAGGGG TGACACTGCT CGCAACAGCA
GCAATCAATG GTAAAAAAGT TGATGCACAG CCATCAGAAT ACACCTATGA CGTTGTTGTT
ATTGGTGCCG GTGGTGCCGG TTTCTCTGCA GGTATCGAAG CGGTTGAGGC TGGCGTATCT
GCTGTTATCA TCGAAAAGCA GCCTATTATT GGTGGTAACT CACTTATCTC TGGCGGCGAA
ATGAACGTGG CGGGTAGCTG GGTTCAAAAA GGAATGGGCA TCACCGATAG CAAAGAGTCG
TTTATTGAAG ATACGTTAAA GGGCGGCGAC TATAAAGGTG ATCCAGAGAT GGTGCGGGTA
ATGGTTGATA ATGCTGTTGA AGCGGCCGAA TGGTTACGTG ACGATATCAA AGTTGATTTC
TACAAAGACC AAATCTTCCA GTTTGGTGGC CACTCAGTAA AACGTGCCGT CATCCCTAAA
GGACACACTG GCGCAGAAGT ATTAAGCAAG TTTGCTGTTA AGGCTGAAGA GATTGGTTTA
CCTGTTCATA TGAACACAAC GGCAAAGAAC CTTATCCAAG ATGAGACAGG CCGCGTTGTA
GGCGTTAAGG CGATGAAGAA CGGTAAGGTT ATCACTTATC ACGCTAAGAA AGCGGTGGTA
ATGGCTGCTG GTGGCTTTGG CGCAAATATC GAAATGCGTA AGAAATTCAA CCCTGAATAC
GATGAGCGCT ACGGTACAAC TAACCACTCA GGTGCAACCG GTGACGGTAT CTTAATGTCT
GAAGCGGTTA ACGCTAAGAC TGCCAACCTA GGCGAAATCC AAGCGTACCC AATCTGTAAC
CCTGAAACAG GTGCTATCGC GTTAATCGCC GATGCGCGTT TCTTTGGTGC TATCTTGGTT
AACCAAGAGG GTAAGCGCTT TGTAGAAGAA CTTGATCGCC GTGACGTTAT CTCTAACGCA
ATCTTGAACC AAACGGGCAA ATACACTTAT GTTATTTGGA ACCAAAAAAT CGATGATCTT
GCTAAGACTA TCGACATGCA CCCTGGCGAA TTCAACGATC TACACTCACG TGGTTTAATG
TTTGAAGTTG ACAGCATCGA AGAAGCGGCT GCGAAATTCA ATATTCCTTT AGCTGCGCTA
CAAAGCACTA TCAGTGATGT TAATAAGTAT GCGGCTACAG GCAAGGATTT AGCATTTAAT
AACCGTGCAG GTCTTGTTGA CATGTCTGAA GGCAAGTACT GGATCTTAAA AGCAACGCCA
TCAGTCCATC ACACAATGGG CGGTGTTGCT ACAACGACTA AAGCAGAAGT ATTAGACAAT
AGTGGCACCA TCATCAAAGG CTTATACGCT GCTGGTGAAG TAACCGGTCT AACTCATGGC
TCTAACCGTC TTGGCGGTAA CGCCTATACC GATATCATCG TTTTTGGTCG CATTGCTGGT
CAGCAAGCCG CGGCACAATA A
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| Protein sequence | MNFKLKKSAL GVAIALPVIL VGCAVTSEMI KSQGTAKGRH GDITVETTFQ NGQITAIDIV
KQKENKVLSA AVYKDVKQAI IDNNSVNVDG ISGATATSDG FKQAVAKSAE LAGVTLLATA
AINGKKVDAQ PSEYTYDVVV IGAGGAGFSA GIEAVEAGVS AVIIEKQPII GGNSLISGGE
MNVAGSWVQK GMGITDSKES FIEDTLKGGD YKGDPEMVRV MVDNAVEAAE WLRDDIKVDF
YKDQIFQFGG HSVKRAVIPK GHTGAEVLSK FAVKAEEIGL PVHMNTTAKN LIQDETGRVV
GVKAMKNGKV ITYHAKKAVV MAAGGFGANI EMRKKFNPEY DERYGTTNHS GATGDGILMS
EAVNAKTANL GEIQAYPICN PETGAIALIA DARFFGAILV NQEGKRFVEE LDRRDVISNA
ILNQTGKYTY VIWNQKIDDL AKTIDMHPGE FNDLHSRGLM FEVDSIEEAA AKFNIPLAAL
QSTISDVNKY AATGKDLAFN NRAGLVDMSE GKYWILKATP SVHHTMGGVA TTTKAEVLDN
SGTIIKGLYA AGEVTGLTHG SNRLGGNAYT DIIVFGRIAG QQAAAQ
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