| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3572 |
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| Symbol | |
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| ID | 5663958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4358243 |
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| End bp | 4359220 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641238234 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001503420 |
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| Protein GI | 157963386 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGT TAAGCGTTAA TAGTCTATTT GATATTCAAG TCTTTGTTTT ATTGTATGAG
TCACTCAATG CGACTGCCGT TAGTCAAACG TTAGGTGTGC CGAGCTCTAA AATCAGCCGT
AGCCTTAAGT CGTTAAGGCA CTCTTTGAAT GCGCCGCTGT TTATTCGTAA ACAACAAGGG
TTTGAGGCCA GCGACTTGGC AAACGATATC TATCCTAAAA TGAAGCGTAT CGTTGAGCTT
GCTAAACACT GTGAAAAGAT TGAAGTGGGT ACAGATAACT TGCGTACTCG TAAGCTGGTT
ATTGCTTGCC CACCGACATT ATCGCTAAAC CTGCTTAATC ATTTACAAGC TAGGGCCTGT
GAGGATCAAG AATCTTTTCT TTTTCATATT AAACCTTGTA CGAGCAATGT GGCTGAGCTT
ATAAAGCAGC AACATGTTGA TATTGCAGTA ACTTATAGCG CTTACAATAC TGAACAATTG
ACATCAAGTT TAATTGCAAC ATCAAGTAAC TATGTGTTGG TTGCCAAACA AGGGCACCCA
TTGTTGAGCC GCCAACAGTC TTTGGAACTT GATGATATAT TTGATTACCC ATACATAAGT
TTTTCAGGTA ATGAGCTCAA CGATGTGATT GATCCGCTGG AGTGCTACGC CTTAGATGTC
GAACGTAAAT TAAAGTTAGT TGTGAAAGTT TGTTTTTTAG CTGATCTCAT GCTGCAGCTA
GAGCAGAGCG ATGCTATTGC ACTTTTAAGC CATTTGGATG CCGTTGAGTT TTTATGTCAG
CGAGGCAATA TTGGCGCATT AAAATTAGAG AGAAGCTTAT GTGAATCGAT CAATCAAAGA
AGTGGTCGAT ACCATTATTA TTTGACGCAG ATGCGTAAGA ATACAGCTTC TCCTAGCTGG
GTAGGCAAAG AGATCCATCG TTATATTCAA GCAAATATAA CCTCAGATAG TGAAGGCTAT
AATGAAGAGA TTAAGTAG
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| Protein sequence | MSKLSVNSLF DIQVFVLLYE SLNATAVSQT LGVPSSKISR SLKSLRHSLN APLFIRKQQG
FEASDLANDI YPKMKRIVEL AKHCEKIEVG TDNLRTRKLV IACPPTLSLN LLNHLQARAC
EDQESFLFHI KPCTSNVAEL IKQQHVDIAV TYSAYNTEQL TSSLIATSSN YVLVAKQGHP
LLSRQQSLEL DDIFDYPYIS FSGNELNDVI DPLECYALDV ERKLKLVVKV CFLADLMLQL
EQSDAIALLS HLDAVEFLCQ RGNIGALKLE RSLCESINQR SGRYHYYLTQ MRKNTASPSW
VGKEIHRYIQ ANITSDSEGY NEEIK
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