| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3562 |
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| Symbol | |
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| ID | 5663948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4349626 |
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| End bp | 4350237 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641238224 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_001503410 |
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| Protein GI | 157963376 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000347826 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAATA CATTTAATCG TAATGATGTC GAGTTACTGG GGAAGAAGAC CCTCTATAAA
GGCTTCTTTA AAATGGACGA GTATCGCTTT AAACATCGTC TCTTTAACGG CGGTTGGAGC
GAGGAGGTTT GTCGTGAAGT GTTCGAACGT GGCCATGCTG TCGTGGTTCT GCCGTACGAT
CCCATATCGG ATGAGGTTGT ATTAATAGAG CAGATCCGAA TTCCAGTGCT TGAAAGTGGC
AAAACCCCTT GGTTACTCGA ACTTGTTGCT GGCATGATCG ACAGTGGCCA GACTTCCGCC
GAAGCTGCCC GCCGCGAGTT ACAAGAAGAA GCAGGCCTAT TTGCTCAAGA GTTAACCAAA
GTAAATGAAT TCTTTTCAAG TCCGGGCGGA ACCAGCGAGC GTTTCGACTT TTACTGGGCT
AAAGTTTGCG CCGCAGAAGC TAAAGGTGTT CATGGTTTAG AACATGAGCA GGAAGATATT
CGAGTGCATG TATTAAGCCG AGAGCAGGCT TACCAGATGC TACTCTCTGG GCGGATTGAT
AATGCATCTA CCGTGATAGG CTTGCTGTGG CTGCAATTAA ACTATCAAGA GATAGGTAAG
CAGCACGCTT AA
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| Protein sequence | MNNTFNRNDV ELLGKKTLYK GFFKMDEYRF KHRLFNGGWS EEVCREVFER GHAVVVLPYD
PISDEVVLIE QIRIPVLESG KTPWLLELVA GMIDSGQTSA EAARRELQEE AGLFAQELTK
VNEFFSSPGG TSERFDFYWA KVCAAEAKGV HGLEHEQEDI RVHVLSREQA YQMLLSGRID
NASTVIGLLW LQLNYQEIGK QHA
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