| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3557 |
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| Symbol | |
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| ID | 5663943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4344561 |
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| End bp | 4345703 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641238219 |
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| Product | L-sorbosone dehydrogenase, putative |
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| Protein accession | YP_001503405 |
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| Protein GI | 157963371 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.683195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGTTTG AAAACTATCG AAATCAATTC GCCGTTGGGA TCTCTGCACT TTGCGCTAAC
TTTATCCTAA GTTGCAGCGC ATTTGCTGCC GAACCTGTCA TGATCACAGT ATCGAAAGGC
TTTGGCTTAA CCTTGTATGC TTCAGCCCTA GGTGATGCTA AGCAACTGGC GGTGGGTGAC
AATGGCACTT TATTTGTCGG CTCTTATCGA GACGGTAGCA TTACCGCCTT AGTCGACGAT
AACAATGATG GCCGGGTCGA TAAGCGTTAT GTGATTGCAA AAGGTTTAGA TTACCCAGAA
GCAATCGCGT TTCATGATGG TGCTTTATAC GTTGCTGAAG AGGAGCGTAT TTTACGCTTC
AATCAAATTG AGTCTCGCCT ACGTAGGCCG GGACGCCCGA AAGAGATTTA CGACCGATTG
CCGGGCAATA GCAAGAAAAG CCGCCGCGCT ATGCAGTTTG GCCCCGATGG ATTGCTATAT
ATTGCCATTG GAGCCCCCTG TAACGTCTGT GAATCCGAAG TGCCCTATAG CAGTATCATA
GCAATAGATG TTGAAACTGG TAACAGCGAG CAGATCGTAA GTGGTGTGCG TAAGGTATTG
GCTTTTGACT GGGCAGTCGA AGATAACACC CTGTGGTTTG CCGATCTTGG CCGTGATTGG
ATGGGGGATA ACTTACCTCC AGATGAGATC AATAAAGTCG AACGCAAGGG GAGTCATTTT
GGTTTTCCCT ATATTCATGC CACCGATATT ATTGAGCCCG CTTACGACAA ACCTAAAAAC
CTAAAAGTGG TGCCTCCAAC CTATGAGTTA CCGGCCCATG TTGGTGCAAA GGGGCTACAC
TTTTATCGCG GTACCCAGTT TCCAGAGCGT TTCCATAATC AGATGTTTGT TGCCGAAAAT
GGCTCTTGGA ACCGTTCGAG TAAGGTCGGC TATCAAGTCG TGATGTTAGA GATTGAAAAT
GGCCAAGTAG CCAAAAGAAG TACCGTAGTG AGTTTTCTAG ACGGAGAATT TCCCGTCGCT
AGACCATATG CATTGGTCAC TGCACCCGAT GGTGCTATGT ATATTTCTGA TGATCTAAAG
GGCAACGTCT ACCGTTTGTT TTATAAAGAA TCAGCAAAAA ATCAGTCACA GGATAATGAT
TAA
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| Protein sequence | MTFENYRNQF AVGISALCAN FILSCSAFAA EPVMITVSKG FGLTLYASAL GDAKQLAVGD
NGTLFVGSYR DGSITALVDD NNDGRVDKRY VIAKGLDYPE AIAFHDGALY VAEEERILRF
NQIESRLRRP GRPKEIYDRL PGNSKKSRRA MQFGPDGLLY IAIGAPCNVC ESEVPYSSII
AIDVETGNSE QIVSGVRKVL AFDWAVEDNT LWFADLGRDW MGDNLPPDEI NKVERKGSHF
GFPYIHATDI IEPAYDKPKN LKVVPPTYEL PAHVGAKGLH FYRGTQFPER FHNQMFVAEN
GSWNRSSKVG YQVVMLEIEN GQVAKRSTVV SFLDGEFPVA RPYALVTAPD GAMYISDDLK
GNVYRLFYKE SAKNQSQDND
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