| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3556 |
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| Symbol | |
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| ID | 5663942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4342294 |
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| End bp | 4344561 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238218 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001503404 |
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| Protein GI | 157963370 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATG CGATAGATTT AAGCCTTGAT GGCGTCGAGC AAATGCCTCT ACGCCGCTTC
ACGGAAGAGG CATATCTGAA CTATTCCATG TATGTCATCA TGGATCGTGC GTTGCCACAT
ATTGGCGATG GACTCAAGCC AGTTCAAAGA CGTATTGTCT ATGCCATGAG TGAGCTAGGC
TTATCGGCTC AATCTAAACA TAAGAAATCA GCGCGTACCG TCGGTGACGT GTTAGGTAAA
TATCACCCTC ACGGTGATAG TGCCTGTTAT GAAGCCATGG TATTGATGGC GCAGCCATTC
TCGTATCGCT ATCCACTGGT TGATGGTCAA GGTAACTGGG GTGCTCCCGA CGATCCTAAG
TCCTTTGCTG CCATGCGTTA CACCGAAGCT AGACTGTCTA AGTTCTCGGA AGTACTACTT
AGCGAGCTAG GTCAAGGTAC AGTGGATTGG GGCGTTAACT TCGACGGCAC CATGAAAGAG
CCGTTAGTGC TGCCTGCACG TTTGCCGCAC ATTTTACTCA ATGGTATCAC TGGCATCGCG
GTGGGTATGG CAACAGATGT ACCCCCACAT AATGTTAAAG AGCTGGTGGG CGCCTGTGTT
GAGTTACTGG ATAACCCTAA AGCCGATTTA GCACGCCTGA TGGAGTTTGT GCCTGGGCCA
GATTATCCAA CCGAAGCAGA GATTATTACG CCAGCGGCTG ATATCACTAA AATCTACCAG
ACGGGTCGTG GTTCGATTAA GGCTCGTGCG GTTTATACCG TAGAAAATGG CGAAGTCGTG
ATTACTGCGC TGCCGCATCA AGCCAGTAGC GGTAAGATTT TAGAGCAGAT AGCCAGCCAG
ATGCAGGCAA AGAAGTTGCC TATGGTGACG GATCTGCGTG ATGAATCCGA TCACGAAAGC
CCGGTTCGCA TGGTGATTGT ACCTCGCTCT AATCGCGTCG ACTGTGAGCA GATGATGGCG
CATCTATTTG CGACAACAGA TTTACAGAAA AGCTATCGAG TTAACTTAAA CGTACTTGGG
CTAAACGGTC GGCCGCAAGT CAAAGGCCTA CTAGAGTTAT TAACTGAATG GCTCACGTTC
AGAATGACTA CGGTTAAGCG CCGTATAGAG TATCGATTAG ACAAGATTTT ATCGAGACTG
CATATTCTAG ATGCCTTGAT GATTGCATTT TTGAATATCG ATGAAGTGAT TGAGATCATT
CGTTATAACG ATGATCCCAA GGCTGAATTG ATCTCACGCT TCAATCTGTC AGACAAGCAA
GCCGATGCGA TTCTTGATTT AAAACTACGC CACTTAGCCA AGCTTGAAGA ATTTAAGATC
AAGGCTGAGC AGAGCGAGCT TGAAGCTGAG CGTGATAAGT TACAACTATT GCTAAGTTCT
GAGCGCCGTA TGAAGACGCT GATCAAGAAA GAGCTTATCA AAGACAGTGA AGATTATGGT
GACGAGCGTC GTTCACCACT AGTTGAGCGT ACAGAGTCTA GAGCGTTAAC TGAGCAAGAG
TTAGTGCCTG TTGAATCTGT TACTGTCGTT TTATCAGAGA AAGGCTGGGT GCGTTGCGCT
AAAGGCCATG AGGTTGATGG AAAGAGTCTG TCATATAAGG CGGGCGATGG CTTCTTACGC
TCCGCTCAAG GGCGTAGCAA TCAACCGAGC GTGTTTATTG ATACCTCGGG TCGAGCATTT
GCCACCGAAA CCCATACCTT ACCGTCTGCT CGTTCTCAAG GGGAACCAAT TACCACTCGC
TTCAATCTAG CTTCTGGAGC GACCATGGAG CACCTACTGC TGTCTGATGA GGAGCAATGC
TACCTACTCG CATCTGATGC AGGTTACGGC TTCATCTGTG CTAATAAAGA TATGGTATCG
CGTAATAAGG CGGGTAAGGC ACTTTTGAGC TTACCTGCTA ATGCTAAGGT GTTGTTCCCG
CAGAGAGTCG ATAAGTCTAA AGCTCAATCG ATTCTAGCTA TCACTAATGA AGGTCGAATG
CTGCTGTTTT CTCTCGATGC GCTGCCGCAG CTATCGAAGG GCAAAGGTAA TAAGATTATC
GGTATTCCAG GTGAACGAGC TAAGAATCGT GAAGAGTTGT TATTGCACCT GAATGTTATC
CCTGAAGACA CTTCGGTAAC CCTGTGGGCG GGTAAGCGCA AGCTAACCTT GAAGCCGAGT
GATCTTGAGC ATTATCGAGG TGAGCGTGGC CGCCGTGGTG CCAAGTTACC GCGTGGTCTG
CAACGTGTAG ACAGTGTAGA GCTAGGCGAT GGTGAGCCTG TTCTCTAA
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| Protein sequence | MSDAIDLSLD GVEQMPLRRF TEEAYLNYSM YVIMDRALPH IGDGLKPVQR RIVYAMSELG
LSAQSKHKKS ARTVGDVLGK YHPHGDSACY EAMVLMAQPF SYRYPLVDGQ GNWGAPDDPK
SFAAMRYTEA RLSKFSEVLL SELGQGTVDW GVNFDGTMKE PLVLPARLPH ILLNGITGIA
VGMATDVPPH NVKELVGACV ELLDNPKADL ARLMEFVPGP DYPTEAEIIT PAADITKIYQ
TGRGSIKARA VYTVENGEVV ITALPHQASS GKILEQIASQ MQAKKLPMVT DLRDESDHES
PVRMVIVPRS NRVDCEQMMA HLFATTDLQK SYRVNLNVLG LNGRPQVKGL LELLTEWLTF
RMTTVKRRIE YRLDKILSRL HILDALMIAF LNIDEVIEII RYNDDPKAEL ISRFNLSDKQ
ADAILDLKLR HLAKLEEFKI KAEQSELEAE RDKLQLLLSS ERRMKTLIKK ELIKDSEDYG
DERRSPLVER TESRALTEQE LVPVESVTVV LSEKGWVRCA KGHEVDGKSL SYKAGDGFLR
SAQGRSNQPS VFIDTSGRAF ATETHTLPSA RSQGEPITTR FNLASGATME HLLLSDEEQC
YLLASDAGYG FICANKDMVS RNKAGKALLS LPANAKVLFP QRVDKSKAQS ILAITNEGRM
LLFSLDALPQ LSKGKGNKII GIPGERAKNR EELLLHLNVI PEDTSVTLWA GKRKLTLKPS
DLEHYRGERG RRGAKLPRGL QRVDSVELGD GEPVL
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