| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3554 |
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| Symbol | |
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| ID | 5663940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4340562 |
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| End bp | 4341488 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238216 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001503402 |
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| Protein GI | 157963368 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGACACA AGCTACTATT ACTCACCAGA GAAAATGAGC GATATCGTCA ACTTTTAAAT
TCGTGCCACC TGCCAAATAC TGAGATCTTA GACGATGATC CCCAAGGTAT TTTTAATGCC
GATATCTGGT TAGCCGAGCC CAAGCTTGCT GCGCCTTTGC TGCCCCACGC TGCCAACTTA
AAGTGGATGC AGTCTACTTT TGCAGGGGTT GATGCCCTAG TAAAACCAAG ACAACGTAAA
GACTATGAGC TCACTAATGT TAGAGGTATT TTTGGGCCAC TGATGAGTGA ATACCTATTT
GGTTATCTGC TGGCTTACCA AAGAGAACAT AGAAAGTACC GCACTCAGCA AGATCAAAAG
ATTTGGTTAC CGGGCAGCTT TAAGACCTTG CAGGGGCAAA CCCTACTACT CTTGGGCACA
GGCTCAATTG CCAAGCATAT AGCTCAAACG GCTAAACACT TTGGCATGCA TGTCATTGGC
ATCAACCGCG GGGCTAAGCC CACTAGAGGC TTCGACGAAG TCGACACCTT GGCCAATCTT
ACTCGCTACC TGCCTCAAGC CGATGCTGTC GCCAGCATTC TGCCTAGCAC CCCAGATACC
CGAGGCGCTC TCAATAAGCA GACTCTGTCA CTACTGAAAG AAGAGGTGGT GCTGTTCAAC
CTAGGCCGCG GCGACGTTCT CGATTTAGAC GCTCTGTATC AGCAATTAAT CAAGCATCCT
GAGCAGCAAG CCATTTTAGA CGTGTTTAAC CAAGAGCCGT TACCTGAAGA GCACCCCATC
TGGTCGCTAG ACAATGTCGT TATTACGCCG CATATCGCTG CGCCGAGTTT TCCTGAGCAG
GTGGTCGAAA TTTTCACAGA GAATTTTCAC AAGTGGATTA AGGGTGAAAA ACTCTCTCAC
AGAGTGCACT TCGAGCGTGG CTACTAA
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| Protein sequence | MGHKLLLLTR ENERYRQLLN SCHLPNTEIL DDDPQGIFNA DIWLAEPKLA APLLPHAANL
KWMQSTFAGV DALVKPRQRK DYELTNVRGI FGPLMSEYLF GYLLAYQREH RKYRTQQDQK
IWLPGSFKTL QGQTLLLLGT GSIAKHIAQT AKHFGMHVIG INRGAKPTRG FDEVDTLANL
TRYLPQADAV ASILPSTPDT RGALNKQTLS LLKEEVVLFN LGRGDVLDLD ALYQQLIKHP
EQQAILDVFN QEPLPEEHPI WSLDNVVITP HIAAPSFPEQ VVEIFTENFH KWIKGEKLSH
RVHFERGY
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