| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3549 |
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| Symbol | psd |
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| ID | 5663935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4334347 |
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| End bp | 4335210 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641238211 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_001503397 |
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| Protein GI | 157963363 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATAAGA TCAAAATTGC CCTGCAATAC ATCATGCCAA AGCACTTACT CTCTCGTCTT
GTAGGTAAGC TTGCAGCGGC TCAGATGGGT TCTGTCACTA CAGCCGCTAT TAACTGGTTT
ATCAAACAAT ACAAGATTGA TATGAGTGAA GCAGCTCAGT CAGAGGCTAC TGCTTACGCC
AGCTTCAACG ACTTTTTTAC CCGTGCACTA AAACCTGGAA TTCGTCCACT ATGTGAAGAC
AATGACTATA TTGTTCATCC CGTAGATGGT GCCGTCAGTC AGCTAGGTCC AATTAAAGAA
GGCCGTATCT TTCAAGCCAA AGGACATGAT TATTCTTCAC TTGCGCTACT AGGCGATCAA
GCCGATGATG CTAAGCGTTT TGAGGGTGGT GATTTTGCCA CCATTTACCT TGCGCCAAAG
GACTATCATC GTATTCATAT GCCGATTAAA GGCACCCTGT CTAAGATGAC CTATGTTCCA
GGTGAACTCT TCTCTGTTAA CCCGTTAACG GCAGAGAATG TACCAGGCCT ATTTGCTCGC
AACGAACGTG TTGTAGCAAT TTTTGAGACA GAAATTGGCC CAATGGCAAT GGTACTGGTC
GGTGCAACAA TCGTAGCTAG TATCGAAACG GTTTGGGCTG GAACAGTAAC ACCACCAACA
GGCAAGAAAG TATTCACTTG GGATTATCCA ACTGAAGGTC CTAATGCTCT GACACTTGAG
AAAGGCGCCG AAATGGGTCG CTTTAAACTC GGTAGCACTG TTGTGATGTT ATTCGCCAAA
GATGCCCTCG ATAAATTTGC TGATGGAGTA GAACCAAAGA GCGTGACGCG TATGGGTCAA
GCCTTTGCAA AAATCGAAGA CTAA
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| Protein sequence | MDKIKIALQY IMPKHLLSRL VGKLAAAQMG SVTTAAINWF IKQYKIDMSE AAQSEATAYA
SFNDFFTRAL KPGIRPLCED NDYIVHPVDG AVSQLGPIKE GRIFQAKGHD YSSLALLGDQ
ADDAKRFEGG DFATIYLAPK DYHRIHMPIK GTLSKMTYVP GELFSVNPLT AENVPGLFAR
NERVVAIFET EIGPMAMVLV GATIVASIET VWAGTVTPPT GKKVFTWDYP TEGPNALTLE
KGAEMGRFKL GSTVVMLFAK DALDKFADGV EPKSVTRMGQ AFAKIED
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