| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3545 |
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| Symbol | |
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| ID | 5663931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4328695 |
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| End bp | 4330173 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238201 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_001503393 |
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| Protein GI | 157963359 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCAAG TACACTCATT ACCGACATCC CTATTTCTAA CTGAGCAAGT TAGAACCGCT
GAATTAAATG CCGTAAATAG TGGTAGCGTC AGCCTATATC AATTGGTGGA AAGAGCCGGG
GCTGCGGCCT TCCAAGTTAT AAGTGAAAGG CAAGCAAATA CGAGCAGAAT AGTGATATTG
GCGGGGCATG GTAACAATGG TGCCGATGCT TATGTTACAG CTACTTTGTT ACTTGAAGCG
GGCTTTTGCG TTAAATTACA AGCAAGTACA CCAAGCAATC CGAGTGACGA GCTTACATGT
GCGATTCATC GATTTTTAGA AGCGGGAGGA GAGGCGGTTA AGTTTTGTGG CTCTCAGATT
GCAGAGGCTG AAGTGATCGT GGATGGGTTG TTAGGCACAG GGATCACTGG TGAATTAAGT
GCTGAACTGG CCATCGTTAT TGACGCCGTA AACAAAAGTA GTGCCTGGGT ACTAAGTCTT
GATGTGCCAT CGGGCCTGAA TCCTGATACG GGAAGTTACA CTACCGCAGC GATTGAAGCT
GACGTGACTC TGACCTTTGG CGCTTTAAAG CAAGGCTTGC TAACGGGAAA GGCGCGTCAC
AATTGTGGGG AGCTGTTGAT TGCTGAGTTG GGACTAACGG GCTATTTACC TGAACCAAGT
GCTACGCAGA TTGTCTGTAA TCAGTGTATT AAGGCGCTTG TTCCCCGTAA AAGAGATGCT
CACAAAGGAG ACTGTGGCAA GGTTTCTGTC ATTGGTGGCG ATTACGGTAT GGCAGGAGCT
GTGAGGCTAG CTGCAGAGGG TTGCCTGCGG AGTGGAGCGG GTTTAGTTAC TGTTATATCA
AGACCTGAAC ACCAGCTTAT TGTCAGCGCG ACTCGTCCCG AACTGATGTT TTGGGGTTGC
GAGCTGGTTG ATATGGAAGT GTATTTAAGG CTAGGGTGGG CTTCGGCCTT AGTGATCGGC
CCCGGTCTAG GGACTGATGA CTGGGGGTAT AATTTACTCA AGGCGGTGGA TCTAAGCGAT
AAGCCCTGCG TGATCGATGC TGACGGCCTT AACTTGCTGA AAGATATGCC TATGAGGCAA
AAAGATTGGA TATTAACGCC TCATCCTGGT GAAGCCGCTA GGCTACTCGA CATAAGCATC
GAAGAGATTG AGCAAGACAG ATTCAAGGCC GTAAGTCTGC TGCATCAGGA GTACGGCGGG
GTGATTGTGC TTAAGGGAGC TGGCACACTA ATTTATGATG GTAATAAGTG TGTGGTAGCA
CCAGTTGGTA ACCCAGGGCT TGCAAGTGGA GGCTGTGGTG ATGTGCTTGC TGGCGTGATT
GGTGGCCTAG TGGCACAAGG CTACTCGAGT ATGGAGGCTG CCTGTTTAGC TGTGGTGATC
CATGGTGGTG CGGCAGATTT GGCGGCTAGA ATGGGCGAGC GTGGAATGCT AGCGAGTGAC
TTAATGCCCT ATATTCGCCA GTTAGTTAAT GAAATCTAG
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| Protein sequence | MSQVHSLPTS LFLTEQVRTA ELNAVNSGSV SLYQLVERAG AAAFQVISER QANTSRIVIL
AGHGNNGADA YVTATLLLEA GFCVKLQAST PSNPSDELTC AIHRFLEAGG EAVKFCGSQI
AEAEVIVDGL LGTGITGELS AELAIVIDAV NKSSAWVLSL DVPSGLNPDT GSYTTAAIEA
DVTLTFGALK QGLLTGKARH NCGELLIAEL GLTGYLPEPS ATQIVCNQCI KALVPRKRDA
HKGDCGKVSV IGGDYGMAGA VRLAAEGCLR SGAGLVTVIS RPEHQLIVSA TRPELMFWGC
ELVDMEVYLR LGWASALVIG PGLGTDDWGY NLLKAVDLSD KPCVIDADGL NLLKDMPMRQ
KDWILTPHPG EAARLLDISI EEIEQDRFKA VSLLHQEYGG VIVLKGAGTL IYDGNKCVVA
PVGNPGLASG GCGDVLAGVI GGLVAQGYSS MEAACLAVVI HGGAADLAAR MGERGMLASD
LMPYIRQLVN EI
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