| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3537 |
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| Symbol | |
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| ID | 5663923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4320239 |
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| End bp | 4321117 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641238193 |
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| Product | HflC protein |
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| Protein accession | YP_001503385 |
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| Protein GI | 157963351 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000127879 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTAGAT TTACAGCGAT AATCGTAGCG GTGCTTATTG CGATTTCATT GTCTTCACTT
TTGGTTGTGA ACGAAGGCGA ACGTGCCATT GTTTCACGCT TCGGTAAAGT TCTTAAAGAC
GACGGTGTGA CGCGTGTTTA TGCTCCAGGT CTTCACTTGA AAATACCTAT GCTTGATAAA
ATCAAGTATA TGGATTCGCG AGTACAAACT CTAGATGGCG CAGCGGACCG CTTCGTAACT
TCTGAGAAGA AAGACTTAAT GGTCGACTCA TACGTGAAGT GGCGCATTAA AGATTTCGAA
CGTTATTACC TTTCTACCAA TGGTGGTATT AAGGCTAATG CCGAAACTTT GCTACAGCGT
AAGATTAACA ACGATCTTCG TACCGAGTTT GGTCGCAGAA CGATTAAAGA GATTGTTTCT
GGTAGCCGCG ATGAGTTGCA ATCGGATGCA TTGAAAAATG CAGCCGAGAG TGCGAAAGAC
TTAGGTGTTG AAGTTGTCGA TGTTCGAGTT AAGCAAATTA ACTTACCTGC AAACGTCAGT
ACCAGTATTT ATCAGCGTAT GCGCGCAGAG CGTCAAGCCG TTGCTAAAGA ACATCGTGCA
CAGGGTCAGG AGCAAGCGGA AATTATCCGT GCTAAGACTG ATGCTAGTGT AACCATTCAA
ACTGCGGAAG CTGAGCGTAA AGCTCTGACT ATTCGTGGTG AAGGTGATGC AGAGGCGGCT
AAGATCTATG CCGACGCTTA CACCAAAGAT GAAGAGTTCT TCAGCTTTAC GCGTAGTTTA
GACGCATATA AGGCAAGCTT CTCTGGTGAT AAAGATGTAA TGGTGCTTGA ACCAGACAGT
GAGTTCTTTA GATATATGAA GAGTTCTACT GGAAAATAA
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| Protein sequence | MGRFTAIIVA VLIAISLSSL LVVNEGERAI VSRFGKVLKD DGVTRVYAPG LHLKIPMLDK
IKYMDSRVQT LDGAADRFVT SEKKDLMVDS YVKWRIKDFE RYYLSTNGGI KANAETLLQR
KINNDLRTEF GRRTIKEIVS GSRDELQSDA LKNAAESAKD LGVEVVDVRV KQINLPANVS
TSIYQRMRAE RQAVAKEHRA QGQEQAEIIR AKTDASVTIQ TAEAERKALT IRGEGDAEAA
KIYADAYTKD EEFFSFTRSL DAYKASFSGD KDVMVLEPDS EFFRYMKSST GK
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