Gene Spea_3534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3534 
Symbol 
ID5663920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp4317329 
End bp4318024 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content45% 
IMG OID641238190 
Productcytochrome c1 
Protein accessionYP_001503382 
Protein GI157963348 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000922213 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TACTGATTGC ATTAGTTGCA TTGGTGCCAA CTCTGGCTAT TGCAGCCGGA 
GGTGGAGCAC CTCTAGAGAA GGCCAATATT GATCTAAACG ACAAAGAGTC TCTGCAGCGT 
GGATTGGATT TATTCCAAAA TAACTGTGCA GGTTGTCATA GTACTCAGTA TCAGCGCTAT 
GAACGTGTAG CGACTGACTT AGGCATTCCA TTAGATGAGA TGCGTATTAA GTACTTACCT 
GAAGGTGCCA AAATTGGTGA GTTGATGGAG AATGCTATCC CTGATGCCGA TGCGGCTAAA 
TGGTTCGGTG CCTCACCTCC TGACTTAACT TTGGTTGCTC GAGTACGTGG TGAAGATTGG 
ATCTACTCAT ACCTCCACGG TTTTTATAAA GATGAAAGCC GTCCATTTGG TGTGAACAAC 
ACAATCTTCC CATTGGTAGG TATGCCGCAT GTGCTTGAAG GCCTTCAAGG TCTTCCGATT 
AAACAGGAAG ATGGAACATT GGTTGCGACC GGTGGTGCCT TGTCTGCTGA AGAGTATGAT 
CAAGTGGTTC GTGATATCAC AGGATTCTTG GTTTACTCTG GCGACCCGGT CAAACTTGAG 
CGTGAAACTC TAGGTTGGTG GGTGATGGGC TTCTTGTTCA TTTTCTTTAT TGTGGCCTAC 
CTCTTAAAGA AAGAGTACTG GAAAGATGTA CACTAA
 
Protein sequence
MKKLLIALVA LVPTLAIAAG GGAPLEKANI DLNDKESLQR GLDLFQNNCA GCHSTQYQRY 
ERVATDLGIP LDEMRIKYLP EGAKIGELME NAIPDADAAK WFGASPPDLT LVARVRGEDW 
IYSYLHGFYK DESRPFGVNN TIFPLVGMPH VLEGLQGLPI KQEDGTLVAT GGALSAEEYD 
QVVRDITGFL VYSGDPVKLE RETLGWWVMG FLFIFFIVAY LLKKEYWKDV H