| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3532 |
|---|
| Symbol | |
|---|
| ID | 5663918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 4316129 |
|---|
| End bp | 4316590 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641238188 |
|---|
| Product | ClpXP protease specificity-enhancing factor |
|---|
| Protein accession | YP_001503380 |
|---|
| Protein GI | 157963346 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2969] Stringent starvation protein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.114177 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAGC TAACCCCGAA CCGTCCATAT TTGCTGCGGG CCTATTACGA CTGGTTGATG
GATAACCAGT TAACGCCCCA TGTTGTTGTT GATGCTTATG TGCCCGGCAC TCAAGTTCCG
CAGCAATATG TTAAAGATGG TCAAATTGTA CTTAATATTA CCGAGAGTGC TGTAGCTGGA
CTACAGATCA CTAACGAGTT TATTGAGTTC AGTGCGCGTT TTGGCGGTGT TCCTCAGCAG
GTACTATTGC CTATGGCCTC TATTGTTGCT ATCTACGCCC GTGAGAACGG TGCTGGTACC
GTCTTCGAAC TCGAAGAAGC GTATCAATTA GATGATGACT TCGAAGAGGA AGCAGGACTT
TCAGTTGTGA AAGAGCCAGT GGTTGAAACT AGCGAACCAG AAGCCGAGAA AGTGGAGGCT
AAAGAGCCAA AACGACGCGG TCATTTAACC TTAGTTAAAT AA
|
|---|
| Protein sequence | MKELTPNRPY LLRAYYDWLM DNQLTPHVVV DAYVPGTQVP QQYVKDGQIV LNITESAVAG
LQITNEFIEF SARFGGVPQQ VLLPMASIVA IYARENGAGT VFELEEAYQL DDDFEEEAGL
SVVKEPVVET SEPEAEKVEA KEPKRRGHLT LVK
|
|---|
| |