| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3531 |
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| Symbol | |
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| ID | 5663917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4313691 |
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| End bp | 4315727 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641238187 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001503379 |
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| Protein GI | 157963345 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0790413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCAGAA CAAGAAATAC AAAAATAGCA GTTATCATCA GCAGTTTATT GTCGTGCCCT
GCTGCAATGG CTAATGAAGC AAACGATGTT TTTTCACTTG GTGAAATCGT CGTGTCAGAC
CAAACAGGTG TTAAAGATAT TGCTATCAAC AACACTATGA CCGCAGAGCA AATTGAGTTA
ATTGGTGCAA AGACTGCGGC TGATGCACTC GACTATGTCC CTGGAGTACA TGTTGCTCAA
TCGAGTAAAG GTGAGAAATT TCTGACCATT CAAGGGTTTG AGCAAGATAA AGTGCTTATT
TTACTTGATG GTGTGCCTTA CTATGAAACC AACTACGGTC AGCTAGATCT TAATCAAATT
CCAGCGAGCA TTATTGCCAA GATCGAGGTT GTTAAAGGTG CTTCATCTGT ACTTTATGGA
CCTAATGGCA TGGGTGGCGT CGTCAATATT ATCACCAAGA AAGGTCAAGA TGGTGTTAGT
GGTGATGTTC AGGCTTCATT CGGGCAGATG GGCCAGAATC ATGAGTCAGC TTCACTTAGC
CTAGGCAAAA ATGGCTTTAG CTTATTCGCA ACTGTTGATC ATCGTGGTCG TGATGCGATG
CGCATGTCTA ATGATTTCGA GCCTGTTTTA TCTGACATTA GAGATAAATA TGGCGACTTG
CCAAAGCAGA TGGTTGTTGA AGATGGCGGT AAGCGCGAAA ACTCAGCCTA CGAGTCGACT
AACATCTGGG TCCGTGGTGG TTACGCCAAC GAAAGTACCG AACTATTTGC TAGTGTTTTT
AGTTTAGATT CAGATCGCGA ATTGCCATAC AACACCCGTA ATAACAAGGT GTTTAGTGAC
TTTAGTAGTT TTGCTGATAT CTCTGAATAC AAAGATACCG GTATGGATTT AAGCGGTTTA
CACCGCGTTA ATGATTGGCT AACAGTGCGT GCTTTAGGTT ACTACCACAT GCATAACGAT
AGCTATGACT CCTATAGCAA TCCTGAGAAA GAGGTAAAAC TTGCGACCAG TAGCTTTAGC
GATTATACCG CTGGTGGCGC TCTGTTTACC GATATGGCGC TAGCCGATTG GAACAGTTTA
AGTCTTTCTG TGAACTTTAA GAATGACGTT CATAAGAAGA AGAATGTTGC CTATGTGGAT
CCTGACCGCT CTCACGCTTA TGAGCGTTCT CAGCTTGATA CCATTAGCTT GGCCGCTGAA
GATACCATGA CATTTGGTGC TTTAAATGTG GTTGCAGGTG TTGCATGGCA TAAACAAACG
GTGGTTGAAG ACCGTGGCAA CGATGCGGCA CCGGGTGAAG ATGGCTCGGA TACACTCGAT
CCAATGTTAG GTATGAGCTA CACCTTCGAT AACGCAGGTT TAGTTTATGG CTCTATTGCT
CAAAAGACTC GCTTTGCGAC TTTTACTGAG ATGTATGACG ACACTGGTGC GCGCCACGAT
ATTAAACCTG AGCGTAATAC TAGCTATACC TTAGGCTGGA AGAATGATTT TAGCCATAAA
TTATTAAACA GTATCGATAT CGGCCTGTTC TACCATGATG TGAGCGATAA GATTGTCTCT
ACTTATATGC CTGATCCAAC GGATCCAGGT TGGGACCTTG AAATCTACCA AAACATTGGT
AAGTCAGAGT TTTACGGTAT CGAGATCACT ACCTTAAGTC AGCTAACAGA AAATATCAGC
TTATCTCTGG ATTACACTTA TACCCATGCA CGTAACAAGA GTGTTGACCG TGATTCGGAT
TACTTCCGTG ACATTCCAAA AGACTCTGTT ACTGCGATCG TTAACTGGTA TCAGCCTTGG
TTAGATATTG ATAGTAACTT ACGCGTTCGC TACCGCACTG ACATCATGAT TGATGAGCGT
TCAGATGAGT GGGAGTCAGA TACGTTAACT ATTGATATGG GTATTAAGAA ATCGATTACA
CCGCAGCTTT CTGCTTACGT TAATCTAAAC AACCTACTCG ATGAGTCGCA CTACGAAGGA
TACGGTCAGC CAAACGAAGG CCGCTCTTAT GAAGTGGGCG TAAAGTACCG CTTCTAA
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| Protein sequence | MIRTRNTKIA VIISSLLSCP AAMANEANDV FSLGEIVVSD QTGVKDIAIN NTMTAEQIEL
IGAKTAADAL DYVPGVHVAQ SSKGEKFLTI QGFEQDKVLI LLDGVPYYET NYGQLDLNQI
PASIIAKIEV VKGASSVLYG PNGMGGVVNI ITKKGQDGVS GDVQASFGQM GQNHESASLS
LGKNGFSLFA TVDHRGRDAM RMSNDFEPVL SDIRDKYGDL PKQMVVEDGG KRENSAYEST
NIWVRGGYAN ESTELFASVF SLDSDRELPY NTRNNKVFSD FSSFADISEY KDTGMDLSGL
HRVNDWLTVR ALGYYHMHND SYDSYSNPEK EVKLATSSFS DYTAGGALFT DMALADWNSL
SLSVNFKNDV HKKKNVAYVD PDRSHAYERS QLDTISLAAE DTMTFGALNV VAGVAWHKQT
VVEDRGNDAA PGEDGSDTLD PMLGMSYTFD NAGLVYGSIA QKTRFATFTE MYDDTGARHD
IKPERNTSYT LGWKNDFSHK LLNSIDIGLF YHDVSDKIVS TYMPDPTDPG WDLEIYQNIG
KSEFYGIEIT TLSQLTENIS LSLDYTYTHA RNKSVDRDSD YFRDIPKDSV TAIVNWYQPW
LDIDSNLRVR YRTDIMIDER SDEWESDTLT IDMGIKKSIT PQLSAYVNLN NLLDESHYEG
YGQPNEGRSY EVGVKYRF
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