| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3528 |
|---|
| Symbol | |
|---|
| ID | 5663914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 4310312 |
|---|
| End bp | 4311646 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641238184 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001503376 |
|---|
| Protein GI | 157963342 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTATCGG TTAACCATAT TAGTTACGCT GTCGGTGACA AGTGCTTATT AGAAGATATT
AGTTTCGAGT TAGCAGCAGG CGAGTTTTTA GCGGTTTTAG GGGCTAATGG TGCAGGTAAA
ACCACATTGA TGAACTGTCT ATGTGGTCTC AATCAACCTA GCAAAGGTGC TGTTCATCTT
AATTCTCGTC CGCTGGAGAA AATGAGCCGA GCCGAAATTG CCCAGCAGAT GGCTTTGGTG
CCACAGCAGC AAGAAACTGC CTTTGCTTTT ACTGCGCTTG AAATGGTGGT AATGGGGCGT
ACCCCTTTTC TATCAACCTT CGAGTCTCCT TCTGAGCAAG ATATTAATGA CGCTAAACGA
GTGATGCAAC TGCTTGATGT TGGAGCCTTG GCCAAAGCAG ATTATAACCG TCTGTCGGGT
GGCGAACGTC AGTTGGTGTT ACTGGCTAGA GCGCTATTTC AGAGTGAGCA ATTATTACTG
CTCGATGAGC CAACGAACCA TCTTGATTAC CGTAATAAAT ATCAAATCCT TTCGCAGGTT
AAACGTAGCT GCGTTGAATC TAAAACCGCC GTGATTGCCA TATTGCACGA TCCAAACTTA
GCCCAGCTAT ACGCTGATAA AGTGCTGCTA TTGGAGCACG GTAAAGTGTT GGATTATGGC
GAGCGTAACG CCGTGATGAC CAGCAAAAAT ATTAGTCGAT TGTATGGTTT GGCAACGGCC
AGCTATCAAG TCGCCGAGCA GGAGTTTTTT ATGCCGCAAA ATATATTGGG GCTCAGTATG
AGTAAAGTGC TCATTATTAC TGGCGAAAGT GGTAGTGGCA AAACCACTGC CTTAGGGGCA
TTTATCGCGC GGTGTAAGCA ACACCAGATA GCGCTTAAAG GAATGCTATG TCCAGGAGTG
ATGCAGGATG GTCGACGTTT TAGTAGCGAT ATTGTCGATA TCGCCACAGG TGAGAAGTGC
TTGTTTGGTC ATCGCACAGG AGTACTCGAT AAGAAAACCG GCACTCGATT CACCTTTACC
GAAGAGGGGA TCGCATTAGG CAAACGGGCG CTTGACCACA TCCACTTTAT GCAAGGCGAT
ATCTGTATTG TAGATGAAAT AGGGCCGATG GAGCTTGGTG GACAAGGCTT TGGCAAGCAG
ATAGCGCCTC TGCTTTCTGT GACGAATAGC CGACATATCT GGGTGGTGCG ACCAAGTTTA
ATCGAGCAGG TTTGCCGCCA CTGGTCGCTT AATAATCCTG AAATTATTGA TGTTGAAGAT
GCTAATTTGC CGCAAAAACT AATGCAGTTT GTTAGCGTAG GCAATGCGGC ATTAACAGGT
GAACCCAACA AATGA
|
|---|
| Protein sequence | MLSVNHISYA VGDKCLLEDI SFELAAGEFL AVLGANGAGK TTLMNCLCGL NQPSKGAVHL
NSRPLEKMSR AEIAQQMALV PQQQETAFAF TALEMVVMGR TPFLSTFESP SEQDINDAKR
VMQLLDVGAL AKADYNRLSG GERQLVLLAR ALFQSEQLLL LDEPTNHLDY RNKYQILSQV
KRSCVESKTA VIAILHDPNL AQLYADKVLL LEHGKVLDYG ERNAVMTSKN ISRLYGLATA
SYQVAEQEFF MPQNILGLSM SKVLIITGES GSGKTTALGA FIARCKQHQI ALKGMLCPGV
MQDGRRFSSD IVDIATGEKC LFGHRTGVLD KKTGTRFTFT EEGIALGKRA LDHIHFMQGD
ICIVDEIGPM ELGGQGFGKQ IAPLLSVTNS RHIWVVRPSL IEQVCRHWSL NNPEIIDVED
ANLPQKLMQF VSVGNAALTG EPNK
|
|---|
| |