Gene Spea_3525 details

Gene Information

• Locus tag: Spea_3525
• ID: 5663911
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 4308023
• End bp: 4308805
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641238181
• Product: hypothetical protein
• Protein accession: YP_001503373
• Protein GI: 157963339

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTAGCTC GAGTTTATAT CAGTTTATTA GCAGCTTTTA GTGTGTTGCC ACTAACGGCC 
AGTGCGACTT CGGTTGCAAG TGACTCTAAT CGCCAGTTAG CAGAGCGCTG GCTAGAACAA 
ATACAACAAC CTGTAATACA AGCAGTGCAG CTTGGCGAAG AGGCGGCTGC ATGGCAACAG 
CAAAAAGCAC AGTCTTTATC GCAGCAACAA CAAGACTTAG GTGAGCTTTA CTGGACTGAG 
TATCAGCTGC AAAAACAGCA AAGGTATTTA GCGTCCTTGC AAGCTGAGGT TGCGCAGTTG 
CAGCAAGACA TTGCCACGAT AACTGCATTA AAGCAGGAGC TCGAGCCACA GCTTGAGATC 
TGGTATGCCA TGTTAGAGCG TCAAGTGAGC AGCGATCTTC CGTTTGACTT TGATGAGCGT 
AAACGTCGCT TAGCATTTTT ACGTACCGCA ATGGATAGTA ATGCTCTGCC ATTAGCCGAG 
CGTTTCAGGC GCTTACTCGA TGTGATGACC ATAGAGGTTG CTTATGGTTA TGGACTGCAG 
TTAACTCAAG AGGTTATCGC AGTCGATGAG CAGCCAGTGC AGGTTAATTT ATTGCGACTT 
GGACGTTTAT CTTGGTTTTA TATTACGCCT GATGAGCAAC ATTTAGGTTG GTTTGATGGG 
CAGTCTCGCC AGTGGCGGCC ATTACCTGTC GATCAACAAG GTGACATTAA ATTAGCCATG 
GCTATCACCG CCAATAAACA GGTAGCGAAG ATTGTGAAGC TTCCATTAGG AGGTTCTAAA 
TAA 

 

Protein sequence

MLARVYISLL AAFSVLPLTA SATSVASDSN RQLAERWLEQ IQQPVIQAVQ LGEEAAAWQQ 
QKAQSLSQQQ QDLGELYWTE YQLQKQQRYL ASLQAEVAQL QQDIATITAL KQELEPQLEI 
WYAMLERQVS SDLPFDFDER KRRLAFLRTA MDSNALPLAE RFRRLLDVMT IEVAYGYGLQ 
LTQEVIAVDE QPVQVNLLRL GRLSWFYITP DEQHLGWFDG QSRQWRPLPV DQQGDIKLAM 
AITANKQVAK IVKLPLGGSK