| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3516 |
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| Symbol | argD |
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| ID | 5663902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4296183 |
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| End bp | 4297400 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238172 |
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| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
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| Protein accession | YP_001503364 |
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| Protein GI | 157963330 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCTCAA AAATGAATCT TACACGTGCC CAATTTGACG AAGTTATGGT GCCTAACTAT
GCGCCTTCTG CAGTAATTCC TGTTCGTGGC GAAGGTAGCC GAGTTTGGGA TCAAGAAGGT
AAAGAGTATA TCGACTTTGC TGGTGGTATC GCGGTTAACT GTTTAGGTCA TTGTCATCCA
GCCTTAGTTG GCGCGCTAAA GACCCAAGGC GAAAAGCTTT GGCATCTTGC TAACGTAATG
ACCAACGAGC CAGCGCTTGA GCTAGCGACT AAGCTTGTCG ATGCCACATT TGCCGACCGC
GTCTATTTTG CTAACTCAGG TGCAGAAGCA AACGAAGCGG CACTTAAACT AGTACGCCGT
TATGCAATGG ATAAATTTGG CGTTGAAAAA GATCAAATCA TCGCATTTGA TAAAGCCTTC
CATGGTCGTA CTTTCTTTAC TGTGAGTGTG GGTGGCCAAG CCGCTTATTC TGACGGTTTC
GGTCCTAAGC CACAGAGCAT TACTCATGTT CCGTTCAATG ATATCGCAGC CCTAGAAGCC
GTCTTCTCTG ATAAGACTTG TGCAGTCATG ATGGAGCCGC TTCAAGGCGA AGGCGGTATT
ATCGATGCTG ATCCAGAGTT TTTAAAGGCG GTTCGTGCCC TTTGTGATAA GCACAATGCA
TTATTGGTAT TCGATGAAGT ACAAACCGGT GTGGGTCGTC TAGGCGAGCT TTACGCTTAC
ATGCGTGGTG ATGTAGTGCC TGATGTATTA ACAACGGCAA AAGCGTTAGG TGGCGGCTTC
CCGATAGCAG CTATGCTAAC AACAAAAGAG ATTGCCGATC ATCTAAAGAT AGGTACTCAC
GGTTCTACCT ACGGCGGCAA CCCTCTAGCT TGTGCCGTAG GTAATGCGGT ACTGGATGTG
GTTAACACGC CAGAAGTATT GAACGGTGTT AAGCTGCGCG AGCAGTTATT GCGTGATGGT
TTAATTGCGA TCAACGCAAA GTATGATGTG TTCTCTGAAA TCCGTGGCCA AGGTCTGTTG
TTAGGTGCGG TCATGAATGA AAGATTCCAG GGTCGTGCTA AAGAGTTCTT AGTAGCCGCT
ATTAACGAAG GCGTAATGAG CCTAGTTGCG GGTGCAAACG TAGTTCGCTT CACGCCATCT
CTAGTGATCC CAGAAGCGGA TATTGCCGAA GGTCTAGCGC GTTTTGAGCG TGCAGTCGCT
AAAGTTGTCG AAGCCTAA
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| Protein sequence | MSSKMNLTRA QFDEVMVPNY APSAVIPVRG EGSRVWDQEG KEYIDFAGGI AVNCLGHCHP
ALVGALKTQG EKLWHLANVM TNEPALELAT KLVDATFADR VYFANSGAEA NEAALKLVRR
YAMDKFGVEK DQIIAFDKAF HGRTFFTVSV GGQAAYSDGF GPKPQSITHV PFNDIAALEA
VFSDKTCAVM MEPLQGEGGI IDADPEFLKA VRALCDKHNA LLVFDEVQTG VGRLGELYAY
MRGDVVPDVL TTAKALGGGF PIAAMLTTKE IADHLKIGTH GSTYGGNPLA CAVGNAVLDV
VNTPEVLNGV KLREQLLRDG LIAINAKYDV FSEIRGQGLL LGAVMNERFQ GRAKEFLVAA
INEGVMSLVA GANVVRFTPS LVIPEADIAE GLARFERAVA KVVEA
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