| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3511 |
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| Symbol | |
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| ID | 5663897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4290267 |
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| End bp | 4290941 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641238167 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001503359 |
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| Protein GI | 157963325 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000699106 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTAC TTCTTGTTGA AGACAACACC TTATTAGTCG AAGAGCTAGT GAAACAGCTT
AAACAGGCTG GTTATGTTAC TGACAGCACA GATAAAGTCA GTGAAGCAGA TTATCTAATC
AAAGAAACCA ACTACGACTG CGTCATTCTC GATATTGGCC TACCAGACGG TAATGGCCTA
GAACTGCTTG AAAGCTGGCG TGAGCAAGGT ATCCATACCC CTGTGATTAT GCTGACCGCA
CGCAGCCAGT GGCATGAAAA AGTCGAAGGG TTTAACTCGG GCGCAGACGA TTATCTAGGT
AAGCCATTCC ATACCCAAGA GTTGCTGGTT CGCATTCAGG CTCTTATTCA GCGTGCGCAC
GGCAAGGCTA ACACCCCTAA CAAGCAGCTC ACCTATGCAG GCGTAGCTCT CGATGAGGGG
CAGCAATCGG TAACAGTTGG CGAGCAAACG TTTGAGCTTA CGGCCATGGA GTTTAGGTTA
CTCAAGATCT TCCTGATGTC TCCTAAAAAG CTCCTGTCTA AGGCACAACT GACTGACAAG
CTTTATCAGT TTGACGATGA AAAAGAGAGT AATGTGGTTG AAGTTTACGT GACCCACTTA
CGTAAGAAGC TTGGCAAAAC CGCCATCGAA ACTCGTCGTG GCCAAGGGTA TATCTTTCAC
GGCCTAACCC AATGA
|
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| Protein sequence | MKLLLVEDNT LLVEELVKQL KQAGYVTDST DKVSEADYLI KETNYDCVIL DIGLPDGNGL
ELLESWREQG IHTPVIMLTA RSQWHEKVEG FNSGADDYLG KPFHTQELLV RIQALIQRAH
GKANTPNKQL TYAGVALDEG QQSVTVGEQT FELTAMEFRL LKIFLMSPKK LLSKAQLTDK
LYQFDDEKES NVVEVYVTHL RKKLGKTAIE TRRGQGYIFH GLTQ
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