| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3508 |
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| Symbol | |
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| ID | 5663894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4287870 |
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| End bp | 4288652 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641238164 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001503356 |
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| Protein GI | 157963322 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00034309 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATTGTA GACCTTGGAT TTTAAATACT GTTGTGGTCT TGTGTTTAGC TGTCAGCAGT
GGAGCTAGTG CATTCTCGAT CCCACAACCT AAAGGCGCCG AAGAAGCAAG CCGCCTCGCA
CATATTCAAC TTAAAGCGAC CCAGGGTGAT GAAGATGCAC AGTATCTGTT GGGTTTAATG
TACTTATCTG GTCGTTTTGT CGCACAAGAC AGAGACTTGG GGCTGCAGTG GCTCACAGAC
GCTGCCGAGC TTGGACATGC CAAAGCGCAG CAGACTATTG CCGATTTGGC ATTTGAAGGT
AGTCTCATCG AGCGAGATAT TGCGACTGCC GAGCAGTGGT ATAGCGAGTT AAGCAAACAG
GGAAATAAGT GGGCTAATTT TAGACTCGGT TTTATTTATG CCGCTGGCGG CCAAGGCATT
GAGCGAAATT GTGGCAAGGC GGTCGAACAG TTTAACGCCG TGGGCGATAT GATCTCTTTA
GGCAATGTGG CTTGGATTTT AGCGACCTGT CCAGAAGCAC AATATCGTAA CGGTAATAAA
GCGCTAGAGT TATCCTTAGC ATTGCTAGAA TCAGATGAGC AAGACCCAAC TAACTTAGAT
AACCTTGCTG CCGCTTATGC CGAAATTGGT GATTTCAACG CAGCTATCTC GACTCAGCAG
AAGGCGATTA AGGCACTTAA CCTTAGTAAA GATCAAAGTA AAACAGCAGA GTTCAAGCAG
CGCCTTAAGA CTTATCAAAA TTACGAACCT TACCGTGAAG TCTTGCCGCT AACCGACAAT
TAG
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| Protein sequence | MNCRPWILNT VVVLCLAVSS GASAFSIPQP KGAEEASRLA HIQLKATQGD EDAQYLLGLM
YLSGRFVAQD RDLGLQWLTD AAELGHAKAQ QTIADLAFEG SLIERDIATA EQWYSELSKQ
GNKWANFRLG FIYAAGGQGI ERNCGKAVEQ FNAVGDMISL GNVAWILATC PEAQYRNGNK
ALELSLALLE SDEQDPTNLD NLAAAYAEIG DFNAAISTQQ KAIKALNLSK DQSKTAEFKQ
RLKTYQNYEP YREVLPLTDN
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