| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3503 |
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| Symbol | |
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| ID | 5663889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4282427 |
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| End bp | 4284022 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641238159 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001503351 |
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| Protein GI | 157963317 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATTG AAGATCCTAT CGTAACCGGA CTCGATTCTG GATGGGCGCA TATTAATGCA
TCTAAGCTCA GTGAAAACCA AACCTTAGAG GCCGATGTGG TGATTGTCGG CAGTGGCGCG
GGAGGCGGCG TCGCGGCAGA AATTCTTACC GAGGCTGGCT TATCTGTGAT CATCGTTGAG
GGCGGTCAAC TAAAGTCATC GAAAGATTTT GTCATGGAGG AGCGAGTCGC TTATCCAGAT
CTCTACCAGC AAGCGGCGGG GATGAAGACA ACCGACAAGG CGATCGGTAT TTTTCAGGGC
CGCGGCGTAG GTGGCTCCAC CACAGTCAAC TGGACCACTT CTATCCGCAC TCCAGAGCCC
GCATTGGATT ATTGGGCGCA GACAAAATCT GTTGTAGGGC TCTCTCGCAC CGAGCTAGAT
CCTTGGTTTG AGAAGATGGA GCAACGGCTT AATATCAGCA AGTGGGCCTA CGATCCTAAC
CGTAATAATC AAGCCTTAAA GCAAGGCTGT GAGACATTAG GTTGGGAGCA CACTGTGATT
AAGCGTAACG TCAAAGGTTG TTGGAATACG GGCTATTGCG GCATGGGCTG CCCGGTAAAT
GCTAAGCAGT CTATGTTGGT GACCACGATT CCCGCGGCGC TAGATCGCGG TGCAACACTG
GTGAGTCAGG CTCAGGTCAT TAAGCTTGAG CATCATAACG ACAAGATCTT CGCTGTTAAG
GCTCAAGCGG TCGATAAAAA TATGAAGCCT ATGCCTGTGG AAGTGATGTT TAAGGCTAAG
CACTATATTC TTGCGGCCGG GGCGATTCAT ACTCCAAGCA TTATGCTGCG CTCCAAGCTA
CCGGATCCTC ATGAGATCAT AGGTAAGCGT ACTTTCTTAC ATCCGACCTT GCTCAGCGGT
GCTGTTTTTA GCGATCCGAT TAATGGTCAC AGCGGGGCGC CGCAGTCTAT CTATTCTGAT
GAATTTGTCT GGCAAGATGG CGCCGACGGA GAGCTAGGCT ACAAGCTTGA AGTGCCACCC
ATTCACCCAA TTCTGATCGC TTCAAAAACT GTTGGCTATG GCAAGAGTCA CGCGCAGCTG
ATGGAGAAAT TTAACCAATT ACAGGTCACT ATCGCATTAG TAAGAGACGG TTATCATGAC
AATAGTCAGG GGGGGCAGGT TAAGCTGACA GACCATGGCT TTACCCTAGA TTACCCTCTT
ACCGATGCGT TTTGGCGTGC GGCGCGGCGT GCATATGCCA GCATGGCAGA GTTGCAGTTT
GCGGCAGGGG CGCAGCAAGT GCTGCCAATC AGTGAGGGTA TGCCTTACTT GTCGAGCTGG
AATGAGGCTA AAAAGGCTAT TAGCGAAATG GATTTGGCAC CGCTGAAAAC CGTAGTGGCA
TCGGCTCATG TGATGGGGGG CTGCCCATTT GGTGAGGACC CCAAGTTAGC TATGGTGAAC
AGCTTTGGTG AATCACACTA CTTTGATAAC CTGTCAGTGA TGGATGGCTC GATATTCCCA
ACCAGCCTAG GGGCCAATCC TCAGTTGTCT ATCTATGGTA TTACCGCCAG AAACGCGACT
CGATTGGCTG AGAGGCTTAA GCCCCAAGCT AGTTAA
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| Protein sequence | MAIEDPIVTG LDSGWAHINA SKLSENQTLE ADVVIVGSGA GGGVAAEILT EAGLSVIIVE
GGQLKSSKDF VMEERVAYPD LYQQAAGMKT TDKAIGIFQG RGVGGSTTVN WTTSIRTPEP
ALDYWAQTKS VVGLSRTELD PWFEKMEQRL NISKWAYDPN RNNQALKQGC ETLGWEHTVI
KRNVKGCWNT GYCGMGCPVN AKQSMLVTTI PAALDRGATL VSQAQVIKLE HHNDKIFAVK
AQAVDKNMKP MPVEVMFKAK HYILAAGAIH TPSIMLRSKL PDPHEIIGKR TFLHPTLLSG
AVFSDPINGH SGAPQSIYSD EFVWQDGADG ELGYKLEVPP IHPILIASKT VGYGKSHAQL
MEKFNQLQVT IALVRDGYHD NSQGGQVKLT DHGFTLDYPL TDAFWRAARR AYASMAELQF
AAGAQQVLPI SEGMPYLSSW NEAKKAISEM DLAPLKTVVA SAHVMGGCPF GEDPKLAMVN
SFGESHYFDN LSVMDGSIFP TSLGANPQLS IYGITARNAT RLAERLKPQA S
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