| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3498 |
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| Symbol | |
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| ID | 5663884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4276820 |
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| End bp | 4278229 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641238154 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_001503346 |
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| Protein GI | 157963312 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTCAAA CAGTCCCGAA TACCGAAGGC CAAGCGCCAT TCTCAAGCCT TAAGCTGAAG
ACTGAGCTGC TAGATAACCT GAAAACAATG GGTTATGACT CTATGACCCC GATTCAAGCG
CAAAGCTTAC CTGCAATCCT TAATGGCGAA GATGTTATTG GCCAAGGTAA GACTGGCTCA
GGTAAAACTG CTGCGTTCGG TTTGGGCTTA TTGCACAAGT TAGACGTTAA ACGTTTTCGT
ATTCAGTGTT TGGTTTTATG CCCAACACGC GAACTTGCCG ACCAAGTGGC AAAAGAGATC
CGTACACTAG CGCGCGGTAT TCACAACATT AAAGTGTTGA CCCTTTGTGG CGGTGTGCCA
ATGGGGCCGC AAATTGGCTC ACTAGAGCAT GGCGCACATA TCATAGTTGG TACGCCGGGC
CGTATTATCG ATCACTTAGA TCGCGGTCGT TTAGATCTAG AAAATGTGCA TACCTTAGTA
CTTGATGAAG CCGACCGTAT GCTAGAGATG GGTTTTCAAG TAGAACTCGA AGGTATCATG
GATCGCATGC CAATAGAGCG CCAGACGCTG CTATTTAGTG CTACTTTCCC TGAGCAGATC
CAGTCGATTG CCGATAAGAT CATGTTCAAG CCTGTGCTGG TTAAAGTGGC TTCGACTCAT
GCTACAAGTA CCATTGAACA ACACTTCTAT GAAGTGGGTA ATAATAACGA TCGCATGCGT
GCGCTTAAGT TATTGCTGCT GCAATACCGC CCTGAGAGCG CAGTGGTATT TTGTAATACC
AAGCGTGAAA CCAAAGACGT TGCGGCGCAG CTGAAGAATG ACGGTTTTAG CGTTGTAGCG
CTACATGGCG ATCTTGAGCA GCGCGATCGC GATCAAACAC TACTTCAGTT TGCCAATAAG
AGTGTGTCTA TCATGGTGGC GACAGACGTT GCTGCTCGTG GTCTTGATAT CGACGCATTA
GACGCGGTAA TTAACTATCA CGTAGCTTAT GACACCGAAG TTCACATTCA CCGTATTGGC
CGTACTGGTC GTGCGGGTAG CAAAGGTTCG GCGCACACTT TCTACAATGA CGAAGACGGC
TACAAGATTG CACTACTCGA AGATTACTTA GAGCGTGATA TCGTTAATGA AGCCCTACCT
TCAGAGCACT TGTTAGATAC CTTCCCGGTA CAACCTGTGA TGATCACCTT GCAAATTGAT
GGTGGTAAAA AGCAGAAGTT ACGTCCTGGT GATATCTTAG GTGCGCTAAC GGGCGAGAAC
GGTATTGAAG GTAGCGAAGT CGGTAAGATT AAAATCACCG ATATGCGCGC TTATGTGGCG
GTTAACCGCA AAGTGGCTAA AAAGGCACTG CAAAAAATTA CTAACGGCAA GCTAAAAGGC
CGTTCATATC GTGCATGGGA AATGCGTTAA
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| Protein sequence | MTQTVPNTEG QAPFSSLKLK TELLDNLKTM GYDSMTPIQA QSLPAILNGE DVIGQGKTGS
GKTAAFGLGL LHKLDVKRFR IQCLVLCPTR ELADQVAKEI RTLARGIHNI KVLTLCGGVP
MGPQIGSLEH GAHIIVGTPG RIIDHLDRGR LDLENVHTLV LDEADRMLEM GFQVELEGIM
DRMPIERQTL LFSATFPEQI QSIADKIMFK PVLVKVASTH ATSTIEQHFY EVGNNNDRMR
ALKLLLLQYR PESAVVFCNT KRETKDVAAQ LKNDGFSVVA LHGDLEQRDR DQTLLQFANK
SVSIMVATDV AARGLDIDAL DAVINYHVAY DTEVHIHRIG RTGRAGSKGS AHTFYNDEDG
YKIALLEDYL ERDIVNEALP SEHLLDTFPV QPVMITLQID GGKKQKLRPG DILGALTGEN
GIEGSEVGKI KITDMRAYVA VNRKVAKKAL QKITNGKLKG RSYRAWEMR
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