| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3494 |
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| Symbol | |
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| ID | 5663880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4271762 |
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| End bp | 4273627 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238150 |
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| Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
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| Protein accession | YP_001503342 |
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| Protein GI | 157963308 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAGCA TCAACTCATT CCCATCGTCG TTAGTCTGGA ATAACATGGA TAAAACAGTA
GAAAAAAAGC TTACTAAATG GCTTAAACAG CAGAAAAAAG CCTGTGGTTT TTATCTGAAT
CTGTCGGTTT TTTTCGGTGT GTTAACCGGA CTAAGCTTGA TGTGCCAAGC CTGGCTCATA
GCAACAGTGC TGCAAGGGAT TATTATTGAT GAGTTACCTA AGAGCGATTT CATTAATCAC
TTCTGGGCGC TGCTAGCACT AACGGTAGTT CGTGGTGTAC TCGCTTTTGC TCGTGAGCGT
GCCAGTTTTC AGGCTGGAGC AAGGCTTCGG GTTCAGATGC GCGGCGCGGT GCTCGATAAG
TTAGCCTTGC TCGGCCCAGC CTTTATTAAG GGCAAGCCCG CTGGCAGCTG GGCCAGTATC
GTGCTGGAGC AAGTGGAAGA TCTACAAGAT TTCTACGCCC GTTATCTGCC ACAAGTGGTG
TTGGCGGGAT TCATTCCCTT GATCATTTTG GTCGCGGTAT TTCCGATCAA TTGGGCGGCG
GGCCTTATTT TGTTGGCGAC CGCACCGCTT ATTCCTATGT TCATGATTTT AGTTGGCATG
GGCGCTGCCG ATGCTAATCG CAAGAATTTC AGTGCATTGG CTCGCTTAAG CGGCCACTTT
ATGGATAGGC TAAAAGGCCT GTCTACCCTC AAGTTATTCA ATCAAGGCGA GAAAGAAGCA
AGAGTTATCC GTAAGGCGTC GGAAGAATTT CGCGAGCGCA CCATGGCGGT GCTGCGAATG
GCGTTTCTAA GCTCTGCGGT ACTGGAGTTT TTTGCGGCGG TATCGATAGC GGTACTCGCT
GTTTACTTTG GCTTTAGCTA CTTACACCAT CTGAATTTTG GTCACTATGG CGTTTCAATC
AGTTTGTTTA CTGGTTTGTT TGTGTTGATC TTAGCGCCTG AATTCTATCA GCCTCTTAGA
GACATGGGCA CTCACTATCA CGCCAAAGCT CAAGCTATTG GTGCGGCACA AGAGCTAATG
GCGTTGCTGG ACCACCCTAC CGAGCAATAT GGGGGTGATA AACAAGTGAA CGGCGCCGTG
GAGATTGAGG CCAAAGATGT ATCTGTCTAT AGCTTAGATG GCAGCCTATT ACTGGGGCCT
GTCAGTTTCC AGATTGAGAC CAATGAACAT GTGGCGATAG TTGGCCCAAG TGGCGCTGGC
AAAACCAGTT TGCTTAACGC CCTACTGGGT TTTTTGCCTT ACAAGGGGCA ACTTAAGATT
GCAGGTACTG AGCTAAGCGA ATTAGCGCTC GAAGATTGGC GTAAGCAGTT GGCATGGCTT
GGGCAAGAGC CGCAGCTTTT CCACGGCACT TTACGAGACA ATATTGCCAT GGGACGAGCC
CTATCGGATG AAGCGATCTG TAAGTTGTTA GAGCAGGCAC AGATCTTAGA TTTTGTTGAG
CAGCAGCCAC TGGGGCTGGA TTATCCTATT GGGGAGCAAA CGGCAGGATT ATCTGTGGGT
CAGGCGCAGC GAATAGCCTT GGCGCGTGCA CTGGCTCAGC AGTCGCAACT CTTCATTCTC
GATGAGCCTA CTGCGAGTCT AGATAGCTTA AGTGAGCAGG CGGTACAAAG TGCCTTAACG
GCAGCCATGC AAGGTAAGGC ATGTGTGATG GTTACCCATA GATTAGAGAA TCTGAGCGCC
ATGGATAAAG TCTTGGTGAT GGAGAAGGGC ATTATAGTGC AGCAAGGGAC ATATGAAGAG
CTTGCCTCAA AGCCCGGTAC CTTTAAACAG ATGCTAGAAG AAGCAGCAAG TGTGAGTGAG
TTCGAGCTTA AAGTCGACAC TCAAGACGCG CATATGCAGC AAACACAAGC TGAGGGAGAT
AAGTAA
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| Protein sequence | MPSINSFPSS LVWNNMDKTV EKKLTKWLKQ QKKACGFYLN LSVFFGVLTG LSLMCQAWLI
ATVLQGIIID ELPKSDFINH FWALLALTVV RGVLAFARER ASFQAGARLR VQMRGAVLDK
LALLGPAFIK GKPAGSWASI VLEQVEDLQD FYARYLPQVV LAGFIPLIIL VAVFPINWAA
GLILLATAPL IPMFMILVGM GAADANRKNF SALARLSGHF MDRLKGLSTL KLFNQGEKEA
RVIRKASEEF RERTMAVLRM AFLSSAVLEF FAAVSIAVLA VYFGFSYLHH LNFGHYGVSI
SLFTGLFVLI LAPEFYQPLR DMGTHYHAKA QAIGAAQELM ALLDHPTEQY GGDKQVNGAV
EIEAKDVSVY SLDGSLLLGP VSFQIETNEH VAIVGPSGAG KTSLLNALLG FLPYKGQLKI
AGTELSELAL EDWRKQLAWL GQEPQLFHGT LRDNIAMGRA LSDEAICKLL EQAQILDFVE
QQPLGLDYPI GEQTAGLSVG QAQRIALARA LAQQSQLFIL DEPTASLDSL SEQAVQSALT
AAMQGKACVM VTHRLENLSA MDKVLVMEKG IIVQQGTYEE LASKPGTFKQ MLEEAASVSE
FELKVDTQDA HMQQTQAEGD K
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