Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3490 |
Symbol | |
ID | 5663876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4262331 |
End bp | 4265525 |
Gene Length | 3195 bp |
Protein Length | 1064 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641238146 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_001503338 |
Protein GI | 157963304 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000664694 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCGA TTATTATGTT CAAAGCGAGT GAAGTTCTAG CTGGTCATTA TGATACAGCC GATCTCAACG AACTGTTCCA AGCGATCAGC GATAATTACA TTGTCGATGA AGAACAATAT TTATCTGATT TGATAAAGCT AGTTCCTTCA AGTGATGAAG AGATCAACCG TGTGACCACC CGAGCACACG AGCTAGTTAA TAAAGTCCGT CAATACGACA AGAAAGGCCT TATGGTCGGT GTTGACGCTT TCCTTCAGCA ATATAGCTTA GAGACTCAGG AAGGCATTAT TTTAATGTGT CTTGCCGAGG CGCTACTGCG TATTCCTGAT GCCGCCACCG CCGACGCACT AATCGAAGAC AAGCTATCGG GTGCTAAGTG GGATGAACAT TTAAGCAAGA GTGATTCAAT CCTAGTAAAT GCATCCACCT GGGGGTTAAT GTTAACGGGT AAAATCGTTA AGCTGGATCA TAGTATTGAC GGTAAACCCA GTAGCCTACT CAACCGCCTA GTCAATAAAG TTGGCGAACC AGTCATTAGA CAATCCATGC TTGCAGCAAT GAAGATCATG GGTAAGCAGT TTGTACTAGG TCGTACCGTT AAAGAAGCCC TCAAGAACAG CAACGACAAA CGTAAACTTG GCTACACCCA TAGCTACGAC ATGTTAGGTG AAGCGGCGCT AACGAAAAAA GACGCGCTAA AATACTTCGA AGATTACTCA AGCGCTATTG CTTCTCTAGG TGCTCAAGAA TATGACACTA GCGATGCGCC TCGCCCAACT ATCTCTATCA AGCTTTCTGC ACTGCATCCT CGCTATGAAG TCGCCAATGA AGACAGAATA CTCACCGAGC TGTATGACAC GCTAATTCTG CTTATCAAGC AAGCTCGCAG CCTTAATGTG GGGATTTCAA TTGACGCAGA AGAGATGGAT AGACTTGAAC TTTCTCTCAA GCTATTCCAG CAATTATATA ACTCAGATGC AGCAAAAGGC TGGGGACTGT TAGGTATCGT TGTTCAGGCC TATTCAAAGC GCGCCTTACC TGTACTTTGC TGGTTAACCC GCCTGTCAAA AGATCAAGGC GATGAGATCC CACTGCGCTT AGTGAAAGGA GCCTATTGGG ACAGTGAACT TAAATGGGCA CAAGAGAACG GCGAAGGTGG TTACCCACTT TATACTCGCA AAGCCGGTAC CGATGTTTCA TATCTTGCCT GTGCGCGATA CTTGTTATCT GATGCTACTC GCGGCGCGAT TTACCCGCAG TTTGCTAGCC ATAACGCACA AACCATTGCC AGTATAACGG ACATGGCTGG CGATCGAGAG TATGAATTCC AACGTCTACA TGGCATGGGT GAAGAACTCT ATGACACGCT CTTAGCCGAA AGTGGCGTGA AAAACGTACG TATTTACGCG CCTGTTGGCG CACACAAAGA GCTTTTGCCT TACCTTGTTC GCCGCCTACT TGAAAATGGT GCCAACACCT CATTTGTACA CAAGCTCGTT GATCCTAAGA CCCCTATTGA GTCATTAGTG GGACACCCTT TGACAACACT TATGGGTTAC AGAAGCCTGG CTAATAATAA AATCGTTATG CCTGAAGATA TATTTGGAGC GGAACGTAAA AACTCCAAGG GACTGAACAT GAACATCATC TCTGAATCTG CACCATTTTT TGCCGCACTC GATAAATTTA AAGACACCAC TTGGTCAGCG GGTCCGTTAA TTAACGGTGA AACCTTAACT GGAGAAACCA AGGAAGTTGT AAGCCCATTC GATACTAATT TGGTTGTTGG TAAGATAGCC TTCGCCAACA ATCAAGCAAT AGAGCAAGCA CTATCGAGTG CCGAAGCCGC TTTTCCAAGT TGGTGTAATA CACCTGTTGA AGTACGTGCC AATGCCCTAC AAAAACTGGC CGACCTGCTT GAAGAAAACC GTGAAGAGCT TATCGTGCTT TGTACGCGAG AAGCCGGTAA GAGCATACAA GATGGCATCG ATGAAGTTCG TGAAGCTGTA GACTTCTGTC GCTACTATGC TGTGCAAGCG AAGAAGATGA TGGCTAAGCC TGAGTTGCTT CCTGGCCCAA CAGGAGAGCT CAACGAGTTA TACTTAGAAG GTCGCGGCAT ATTTGTTTGT ATTAGCCCAT GGAACTTCCC ATTAGCTATC TTCTTAGGTC AAGTGACTGC TGCTCTAGCG GTAGGTAATA CCGTAATCGC AAAACCAGCA GAGCAGACAT CGATTGTTGG TTACAGAGCG ACTCAGCTTG CACATGAAGC AGGTATTCCT AAGGACGTGC TGCAATTCCT ACCAGGTACT GGTGCTACAG TCGGAGCGGC GATTACTTCA GACGAACGTA TTGCTGGCGT ATGTTTTACT GGTTCTACTG CCACAGCGAA GCTAATTAAC CGTACACTTG CCATGCGTGA AGGTGCGATT ATTCCACTGA TTGCGGAAAC TGGCGGCCAA AATGCCATGG TGGTCGATTC AACATCTCAA CCAGAGCAAG TGGTTAATGA TGTCGTATCT TCTTCTTTCA CCAGTGCTGG GCAGCGTTGC TCTGCGTTAC GAGTGCTGTT TTTACAAGAT GACATCGCCG ATCGCGTGAT CGACGTGATG AAAGGCGCGA TGGAAGAACT GACTATTGGT AATCCAAACT CAGTGAAAAC CGATGTTGGC CCAGTAATCG ATGCCGCAGC GGCTGCTAAC TTAAATGCGC ATATTGACCA TATTAAGCAA GTGGGCAAGC TACTCAAGCA AGTCGAACTG CCTGAAAACA CTAAAAATGG TTACTATGTA GCGCCAACAG CAGTAGAGAT TGACTCGATT AAAATGCTGG AAAAAGAGCA CTTCGGTCCA ATTTTGCATG TTATCCGTTA CAAGTCTTCA GAGCTTGATA AGGTAATCGC CGAGATCAAC TCAACCAACT TTGGTCTGAC TTTAGGCATT CACAGCCGTA ACGAAGGCCA CGCCCTCAAA CTCGCTGATA AGGTGAGAGC GGGTAACGTT TATATCAATC GTAATCAGAT TGGTGCAGTA GTTGGGGTTC AACCTTTCGG TGGCCAAGGC CTATCTGGCA CAGGCCCTAA AGCCGGTGGT CCACACTACC TAACGCGCTT TATTACTGAA AAAACTCACA CCAACAATAT TACCGCTATT GGTGGTAATG CGACCCTGTT GTCATTAGGT GATAGCGAAG ATTAG
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Protein sequence | MEAIIMFKAS EVLAGHYDTA DLNELFQAIS DNYIVDEEQY LSDLIKLVPS SDEEINRVTT RAHELVNKVR QYDKKGLMVG VDAFLQQYSL ETQEGIILMC LAEALLRIPD AATADALIED KLSGAKWDEH LSKSDSILVN ASTWGLMLTG KIVKLDHSID GKPSSLLNRL VNKVGEPVIR QSMLAAMKIM GKQFVLGRTV KEALKNSNDK RKLGYTHSYD MLGEAALTKK DALKYFEDYS SAIASLGAQE YDTSDAPRPT ISIKLSALHP RYEVANEDRI LTELYDTLIL LIKQARSLNV GISIDAEEMD RLELSLKLFQ QLYNSDAAKG WGLLGIVVQA YSKRALPVLC WLTRLSKDQG DEIPLRLVKG AYWDSELKWA QENGEGGYPL YTRKAGTDVS YLACARYLLS DATRGAIYPQ FASHNAQTIA SITDMAGDRE YEFQRLHGMG EELYDTLLAE SGVKNVRIYA PVGAHKELLP YLVRRLLENG ANTSFVHKLV DPKTPIESLV GHPLTTLMGY RSLANNKIVM PEDIFGAERK NSKGLNMNII SESAPFFAAL DKFKDTTWSA GPLINGETLT GETKEVVSPF DTNLVVGKIA FANNQAIEQA LSSAEAAFPS WCNTPVEVRA NALQKLADLL EENREELIVL CTREAGKSIQ DGIDEVREAV DFCRYYAVQA KKMMAKPELL PGPTGELNEL YLEGRGIFVC ISPWNFPLAI FLGQVTAALA VGNTVIAKPA EQTSIVGYRA TQLAHEAGIP KDVLQFLPGT GATVGAAITS DERIAGVCFT GSTATAKLIN RTLAMREGAI IPLIAETGGQ NAMVVDSTSQ PEQVVNDVVS SSFTSAGQRC SALRVLFLQD DIADRVIDVM KGAMEELTIG NPNSVKTDVG PVIDAAAAAN LNAHIDHIKQ VGKLLKQVEL PENTKNGYYV APTAVEIDSI KMLEKEHFGP ILHVIRYKSS ELDKVIAEIN STNFGLTLGI HSRNEGHALK LADKVRAGNV YINRNQIGAV VGVQPFGGQG LSGTGPKAGG PHYLTRFITE KTHTNNITAI GGNATLLSLG DSED
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