Gene Spea_3489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3489 
Symbol 
ID5663875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4261131 
End bp4261676 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content49% 
IMG OID641238145 
ProductSH3 type 3 domain-containing protein 
Protein accessionYP_001503337 
Protein GI157963303 
COG category[T] Signal transduction mechanisms 
COG ID[COG3103] SH3 domain protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000200384 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACTTT CCCCTTCTTT GCTTGCAGCA AACCAAACGC GCTACATCTC AGATGATGTT 
TACATCTACC TCCATGGTGG CCCAGGAACT CAGTTCCGTA TCTTGGGCAG CATCGAAGCT
GGCCAAGAGG TAACGTCACT TAAGGAAACC CAAGGCGACT ACAGTAAAAT AGTCGACCAC
AAAGGTCGTG AAGGCTGGGT TCAGAGCAAG ATGCTAAGCG CTAAAATGAG CCTTCGTGTT
CAGCTTCCTG CGATACAAGC AGAGCTTAAG CAAACCAAAG CTGAACTAGA GACAGCATTA
AGCAGCGGCG ATAACAATGC CCAGGAGCTG AGACAAGTTA AATCTCAACT TGCTGCGGCT
CAAAAAGCCT TGGACAGCGC TAGCAACGAG CGCGATAGCG CCAAGGCTAA ACTTGCGAGT
ATGCAGAGAA ACGAACGTTT CGAGATGTGG AAGCAAGGTG GTTTTATCGC AGCGGGTGGT
TTACTACTGG GTATCATCTT AGTCTATCTA CCAAGGCCAC AGCGTAAGCC TAAGAGCCGC
TGGTAA
 
Protein sequence
MLLSPSLLAA NQTRYISDDV YIYLHGGPGT QFRILGSIEA GQEVTSLKET QGDYSKIVDH 
KGREGWVQSK MLSAKMSLRV QLPAIQAELK QTKAELETAL SSGDNNAQEL RQVKSQLAAA
QKALDSASNE RDSAKAKLAS MQRNERFEMW KQGGFIAAGG LLLGIILVYL PRPQRKPKSR
W