Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3489 |
Symbol | |
ID | 5663875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4261131 |
End bp | 4261676 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641238145 |
Product | SH3 type 3 domain-containing protein |
Protein accession | YP_001503337 |
Protein GI | 157963303 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3103] SH3 domain protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000200384 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACTTT CCCCTTCTTT GCTTGCAGCA AACCAAACGC GCTACATCTC AGATGATGTT TACATCTACC TCCATGGTGG CCCAGGAACT CAGTTCCGTA TCTTGGGCAG CATCGAAGCT GGCCAAGAGG TAACGTCACT TAAGGAAACC CAAGGCGACT ACAGTAAAAT AGTCGACCAC AAAGGTCGTG AAGGCTGGGT TCAGAGCAAG ATGCTAAGCG CTAAAATGAG CCTTCGTGTT CAGCTTCCTG CGATACAAGC AGAGCTTAAG CAAACCAAAG CTGAACTAGA GACAGCATTA AGCAGCGGCG ATAACAATGC CCAGGAGCTG AGACAAGTTA AATCTCAACT TGCTGCGGCT CAAAAAGCCT TGGACAGCGC TAGCAACGAG CGCGATAGCG CCAAGGCTAA ACTTGCGAGT ATGCAGAGAA ACGAACGTTT CGAGATGTGG AAGCAAGGTG GTTTTATCGC AGCGGGTGGT TTACTACTGG GTATCATCTT AGTCTATCTA CCAAGGCCAC AGCGTAAGCC TAAGAGCCGC TGGTAA
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Protein sequence | MLLSPSLLAA NQTRYISDDV YIYLHGGPGT QFRILGSIEA GQEVTSLKET QGDYSKIVDH KGREGWVQSK MLSAKMSLRV QLPAIQAELK QTKAELETAL SSGDNNAQEL RQVKSQLAAA QKALDSASNE RDSAKAKLAS MQRNERFEMW KQGGFIAAGG LLLGIILVYL PRPQRKPKSR W
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