Gene Spea_3485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3485 
Symbol 
ID5663871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4256343 
End bp4257140 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content46% 
IMG OID641238141 
ProductIon transport 2 domain-containing protein 
Protein accessionYP_001503333 
Protein GI157963299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.319934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATA AAAAGCGCTG GCTACTTCAG CCTGAAACGC CCCCTACCCC GATTCAACTT 
GCGATGATGT TACTGTCATT ACTGTCGGTG ATAGTGGTGC TAGTACTGAC ATTCGGTCGC
GTCGATGGCG AAACCAAGCG CCTTTTGTTT ATGATAGATT TCAGTATCTG TCTTATCTTC
ATGTCTAACT TCTTTTTTGA ACTGTTCAAA GCCAACGAAA AAGCCAGCTA TTTAAAGCAC
CACTGGATAG ATTTCGTCGC CAGTATTCCC GCCATTGAAG CCCTTAGAAT GGCGCGTCTG
TTCCAGATCC TACGAGTTAT CCGTCTCATT CGCATGAGCC GCTCATTGAT TGTTCCTATG
CTGAAACAGC GTAGGCAAGC GACGATAGCG AGCTTATTAG TTGCTCTCAT CACCATTTTA
ACCTTTGCTT CAGTGCTAGT GCTGATTGTT GAGAGCGGCG TAGAAGGTGC CAATATCGAT
ACCGCCGAGA GTGCAATTTG GTGGGCCTTA GTGACAATAT CGACTGTAGG TTATGGTGAT
TATTACCCTG TGACGACAGC AGGCCATATC ATAGGTGGTG TGGTGATTGT TTGTGGCGTC
AGTTTCTTCG GTGTGATTTC AGGTTATATG GCATCGGTTT TTGTCGCGCC CGATGAAGCA
GAGAAGCTCG ATAGCCATAC AGAAGAAATT CGCTCAGAGC TTAATACCAG CCTTGCGCGC
ATGGAGGCGA ATCAAGAGAA GTTGATCGCC GAGCTCAATG AGCTAAAACA AGCCATCGAA
GATAAGAAGC CTGAATAA
 
Protein sequence
MANKKRWLLQ PETPPTPIQL AMMLLSLLSV IVVLVLTFGR VDGETKRLLF MIDFSICLIF 
MSNFFFELFK ANEKASYLKH HWIDFVASIP AIEALRMARL FQILRVIRLI RMSRSLIVPM
LKQRRQATIA SLLVALITIL TFASVLVLIV ESGVEGANID TAESAIWWAL VTISTVGYGD
YYPVTTAGHI IGGVVIVCGV SFFGVISGYM ASVFVAPDEA EKLDSHTEEI RSELNTSLAR
MEANQEKLIA ELNELKQAIE DKKPE