| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3465 |
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| Symbol | |
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| ID | 5663851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4235342 |
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| End bp | 4236721 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641238121 |
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| Product | integrase family protein |
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| Protein accession | YP_001503313 |
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| Protein GI | 157963279 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTCTA TTATTCAAAC AAAGCTTAAC TTAGGCTCAC TGCCATCGTT TGATGGGGAG
TTACTGGATA TTGCAGGCGA GTATCAGATC CGAAATATTA ACCACCAACG CCACCATGAG
GTCGATAAAT TCCCATTACT ATTCAGTGAT ACACGATTAA AAGATTGTTT AGAAATAAAC
CTGTTCCTTG AGTATCGTTA CAAAGGCAAG TTTCTTCGCC CCTCTAGAGG AGGTCATAAG
AACCTCTTAG GAGGTGTAAC GGTAAAAACA ATTAAAAGCA TTGCCAACTC GCTTAAAGTT
TTTCTGGTGT GGCTAGAGGC CGCAGGATTA GAGTGGAAAG ACCTATATGC TGTCTCAGCA
TCAGAGAAAG CAAAAGAGTG GTTACTGCCT TATCGCTTTC GCACCCACTT GATTGACCGA
ATCAAGAATA ATGAGCTATC GCTCGATACC GCAAATTTGT ACATATCTCA TGTTAGACAA
TTGTATGAAT GGGCTTGGCG AACACGTCGA ATTGAAAAAC TGCCATTTAA ATATACCGAC
AAGGTGATTA GGAAAAAACG CTCTAACTCA GAGTTTGATT TGATATTCGC ATCCTTTAGT
TATGACAGAG GGATGGTAGT TCAAACTAAT GACTTAACTA TTCCTAAAAA GCATCGACAA
AAGAAAATGG TGTTGAACGA TGGACTTTCC CCGTATAGCC AAAAAGAGTT AAAGGATTTC
TACTCTACAA ACCACATGCA ATCAGAGTCC CGCAGACTAT GGGCAGATTT AGCGTTGTTG
TGTGGGTTAC GAGCTTTTGA AGTGGTACTT TTAAAGGAGT CTGAAATTGT TGATACAGCC
TTGGACGATA CCAAAGTTTA CAGCGTTGAT GTACTTGGCA AGTTTAATAA GCATAGACAG
ATACTTGTAC CACGTTCTTT GATGTCGAGA CTCTGGAACT ACAGGAACTC ACCAGAAAGA
CTAAAGCGCT CTGCCAAATG GGGGGCAAAC CAGAATGCAG AAATAGACAA ACCTCTTTTC
ATTAACCGTT CTGGCAATAT CCTAAATGAA GGGTCGATCA CTAATATTAC GTCCAACGCT
GCGAAAGAAT TACTCACCAG TAAAATTGAG TTTTATAGGT CGTTTCATGA TCTGCGCTCA
ACTTTTGCTA CCTCATTAGC GCGTTTTTTG TTGGAGAAAG ATTTACCCCT TGGATTCATC
CAATACAGGC TTATGACTTT ATTGGGTCAC TCTAAGTTTT CGACTACTGA GAAATACATC
GATCTGGCAC GAACCATTAC TTATGACAAG CGCATGAAAT CTTGGGTTGA GGATGTGTTT
GGAGGTTTAG AGCAAGAGTT AAGCGTTGAA GTAACTGAGC TAGAGATAGG AGTTCGATAG
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| Protein sequence | MISIIQTKLN LGSLPSFDGE LLDIAGEYQI RNINHQRHHE VDKFPLLFSD TRLKDCLEIN
LFLEYRYKGK FLRPSRGGHK NLLGGVTVKT IKSIANSLKV FLVWLEAAGL EWKDLYAVSA
SEKAKEWLLP YRFRTHLIDR IKNNELSLDT ANLYISHVRQ LYEWAWRTRR IEKLPFKYTD
KVIRKKRSNS EFDLIFASFS YDRGMVVQTN DLTIPKKHRQ KKMVLNDGLS PYSQKELKDF
YSTNHMQSES RRLWADLALL CGLRAFEVVL LKESEIVDTA LDDTKVYSVD VLGKFNKHRQ
ILVPRSLMSR LWNYRNSPER LKRSAKWGAN QNAEIDKPLF INRSGNILNE GSITNITSNA
AKELLTSKIE FYRSFHDLRS TFATSLARFL LEKDLPLGFI QYRLMTLLGH SKFSTTEKYI
DLARTITYDK RMKSWVEDVF GGLEQELSVE VTELEIGVR
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