| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3450 |
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| Symbol | |
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| ID | 5663836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4217550 |
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| End bp | 4218887 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238106 |
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| Product | permease DsdX |
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| Protein accession | YP_001503298 |
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| Protein GI | 157963264 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCAC AACTGTGGAT TATCGGTACT CTGCTTAGCA GTATCTTGCT GATTGTTATC
AGCATCGTTA AGTTCAAGTT GCACCCGTTC TTGGCACTCT TGTTAGCCAG CTTCTTTGTG
GGCGGCATGA TGGGTATGGC GCCACTTGAA ATGATCAAGG CGATGGAGTC AGGCATTGGT
GGCACCTTAG GCTTCTTGGC TATCGTAATC GGTCTGGGCA CCATCTTGGG TAAGATGATG
GAGATCTCAG GCGCCGCTGA GCGAATTGGT ATCACCCTGC TAAAATCTCG TTACCTAAGC
CCTGATGTGA TCATGGTGCT GGTGGGCCTT ATTTGCGGTA TCACCTTGTT CGTAGAAGTG
GGCGTGGTAT TGCTTATTCC ACTCGCTTTC TCTATCGCTC GTAAAACCAA TACATCCTTG
CTAAAACTTG CCATTCCGCT ATGTACCGCC TTGATGGCTG TGCACTGTAT TGTGCCGCCA
CACCCTGCAG CGTTGTTTGT GACTAATGCA CTAGGCGCCG ATGTGGGTTC GGTAATTATC
TGGGGTCTGC TAATCGGTCT ATTGGCCTCG TTAATAGGTG GTCCACTATT CCTTAAGCTG
TTTGGCGACA AGCTGCCACA CTTAAGCGTA CCTGCCGAGT TTAGTGAAGT TTCAACCCGT
AAAGAGAGTG AGTTGCCATC ACTTGGCACA ACACTGTTCA CCATCCTTTT GCCAATCATT
TTAATGTTGG TTAAAACCGT GGCCGAGCTG TACATGGAGC CGGGCACTGC GCTTTATACC
ACCCTTGAAT TTATTGGTAA CCCAATCACC GCGATGTTTA TCGCAGCCTT TGTGGCTTAT
TACCTGCTTG GTCTTCGCAA CAAGATGACC ATGGGCACCT TGCTGACTAA AACCGAAGAC
TGTTTCGCCT CTATCGCTAA CATCTTGCTG ATTATCGGTG CAGGCGGCGC GTTTAACGGC
GTATTAAGTG GCAGCGGCAT GGGCGACAGC CTAGCGCAAA TCTTGGCAAA CCTTGATATG
CATCCAGTGC TACTGGCTTG GTTAGTGGCC ATTATCTTGC ACGCGGCGGT GGGTTCGGCA
ACGGTTGCTA TGATGGGCGC TACCGCGATT GTGTCGCCGT TATTAGTGCT ATACCCAGAT
TTGAACCCAG TTATCGTGAC CTTAGCTATC GGCTCTGGCG CTATAGGTTG CACTATCGTC
ACCGACTCTT TGTTCTGGTT GGTTAAGCAG TACACCGGCG CCACAATGAA ACAAACATTT
ATGTATTACA CCAGCGCGAC CTTTATTGCC TCACTTGTGG CACTGGCTGC GACTTTTGCA
CTGTCTTATG TTATTTAA
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| Protein sequence | MESQLWIIGT LLSSILLIVI SIVKFKLHPF LALLLASFFV GGMMGMAPLE MIKAMESGIG
GTLGFLAIVI GLGTILGKMM EISGAAERIG ITLLKSRYLS PDVIMVLVGL ICGITLFVEV
GVVLLIPLAF SIARKTNTSL LKLAIPLCTA LMAVHCIVPP HPAALFVTNA LGADVGSVII
WGLLIGLLAS LIGGPLFLKL FGDKLPHLSV PAEFSEVSTR KESELPSLGT TLFTILLPII
LMLVKTVAEL YMEPGTALYT TLEFIGNPIT AMFIAAFVAY YLLGLRNKMT MGTLLTKTED
CFASIANILL IIGAGGAFNG VLSGSGMGDS LAQILANLDM HPVLLAWLVA IILHAAVGSA
TVAMMGATAI VSPLLVLYPD LNPVIVTLAI GSGAIGCTIV TDSLFWLVKQ YTGATMKQTF
MYYTSATFIA SLVALAATFA LSYVI
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