Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3442 |
Symbol | |
ID | 5663828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4207352 |
End bp | 4208365 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641238098 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001503290 |
Protein GI | 157963256 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAGCCAA CCGTCATCCA TCTTATTGAT GATAACAAAC TTGGTGGCGT CAACTTGGCG CTAGAGAGTC TGGCAGCCTC AAAGTTGAAT CAACTCTTTA GGTTTAAGTT AATTCATAGA CGTTTCTCAT TCCCCTCCTT TAGACGTTAC ACCGCCGATA TCATAGTGGT ACACGGCGCA CTTAGCTGGC GAAAGTTCCC GGCACTGTTG ACGCTTAAAC TCGCGAATTT TGGCACGCCG ATTCTCTATC AAGAGCATCA CTATAGCCGT GAGTTTGTGG CGCAATGTGT GGTTCATCCT AAACGCTTCT ATAGCATGCT TAAGTTTGGC TACGGCTTGA TGGATAAGGT GTTGCTGGTA TCGCAAGCAC AAGTGAATTG GTTAGATGAG CTTAAGATCC TCGCAACAGA TAAAAGGGTA TGCCTGGGTC AGGCAAAAGA GCTGGATAAG TTTAGACATT TACCGAGCAG AGCATGCTCT TCACCGCTTA AGCTGGTGGC TTGTGGGCGG TTAAGTCGGC AAAAGGGTTT CGATTTACTG ATAAAGGCGA TGGTAAAGTT ACCCGCTGAT AGGGTGAGCC TGACCTTAGC TGGAGAGGGT GAGGAGGCTA GTGCATTAAA TGCTTTAGCC AGGCCACTTC CTCATGTACG TCTAATCGGT GAGGTGCAAG ATGTCGCGCG ATTTTTAGAC TCTGGCGATG TGGTTATCAT CCCTTCTCGG TGGGAGCCAT TTGGTTTGAC CTGTTTAGAA GCTATCGCGG CGGGTAAGCC TGTGATCTTG GCAAATGTAG ATGGCTTGGG GGATCAAGTC GAGTGGCTCA AGCAGAAGGG CGGCGGATAT CAGTTAATCG ATGACTTATC AGTTGAGGGG ATCGAAAGGG CTATCAACCG AGTGTTAGAT GCTGAGCCGT TACGGATTAA TTGCCAACAG CGCCAGTCGG CTGAGCAGGC ATGGCAGCAG ATGCTGAATA GCTGGCAGAC AGTTTTAGAA AATCAGTTGC AACATCGTAG ATAG
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Protein sequence | MQPTVIHLID DNKLGGVNLA LESLAASKLN QLFRFKLIHR RFSFPSFRRY TADIIVVHGA LSWRKFPALL TLKLANFGTP ILYQEHHYSR EFVAQCVVHP KRFYSMLKFG YGLMDKVLLV SQAQVNWLDE LKILATDKRV CLGQAKELDK FRHLPSRACS SPLKLVACGR LSRQKGFDLL IKAMVKLPAD RVSLTLAGEG EEASALNALA RPLPHVRLIG EVQDVARFLD SGDVVIIPSR WEPFGLTCLE AIAAGKPVIL ANVDGLGDQV EWLKQKGGGY QLIDDLSVEG IERAINRVLD AEPLRINCQQ RQSAEQAWQQ MLNSWQTVLE NQLQHRR
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