Gene Spea_3442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3442 
Symbol 
ID5663828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4207352 
End bp4208365 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content48% 
IMG OID641238098 
Productglycosyl transferase group 1 
Protein accessionYP_001503290 
Protein GI157963256 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGCCAA CCGTCATCCA TCTTATTGAT GATAACAAAC TTGGTGGCGT CAACTTGGCG 
CTAGAGAGTC TGGCAGCCTC AAAGTTGAAT CAACTCTTTA GGTTTAAGTT AATTCATAGA
CGTTTCTCAT TCCCCTCCTT TAGACGTTAC ACCGCCGATA TCATAGTGGT ACACGGCGCA
CTTAGCTGGC GAAAGTTCCC GGCACTGTTG ACGCTTAAAC TCGCGAATTT TGGCACGCCG
ATTCTCTATC AAGAGCATCA CTATAGCCGT GAGTTTGTGG CGCAATGTGT GGTTCATCCT
AAACGCTTCT ATAGCATGCT TAAGTTTGGC TACGGCTTGA TGGATAAGGT GTTGCTGGTA
TCGCAAGCAC AAGTGAATTG GTTAGATGAG CTTAAGATCC TCGCAACAGA TAAAAGGGTA
TGCCTGGGTC AGGCAAAAGA GCTGGATAAG TTTAGACATT TACCGAGCAG AGCATGCTCT
TCACCGCTTA AGCTGGTGGC TTGTGGGCGG TTAAGTCGGC AAAAGGGTTT CGATTTACTG
ATAAAGGCGA TGGTAAAGTT ACCCGCTGAT AGGGTGAGCC TGACCTTAGC TGGAGAGGGT
GAGGAGGCTA GTGCATTAAA TGCTTTAGCC AGGCCACTTC CTCATGTACG TCTAATCGGT
GAGGTGCAAG ATGTCGCGCG ATTTTTAGAC TCTGGCGATG TGGTTATCAT CCCTTCTCGG
TGGGAGCCAT TTGGTTTGAC CTGTTTAGAA GCTATCGCGG CGGGTAAGCC TGTGATCTTG
GCAAATGTAG ATGGCTTGGG GGATCAAGTC GAGTGGCTCA AGCAGAAGGG CGGCGGATAT
CAGTTAATCG ATGACTTATC AGTTGAGGGG ATCGAAAGGG CTATCAACCG AGTGTTAGAT
GCTGAGCCGT TACGGATTAA TTGCCAACAG CGCCAGTCGG CTGAGCAGGC ATGGCAGCAG
ATGCTGAATA GCTGGCAGAC AGTTTTAGAA AATCAGTTGC AACATCGTAG ATAG
 
Protein sequence
MQPTVIHLID DNKLGGVNLA LESLAASKLN QLFRFKLIHR RFSFPSFRRY TADIIVVHGA 
LSWRKFPALL TLKLANFGTP ILYQEHHYSR EFVAQCVVHP KRFYSMLKFG YGLMDKVLLV
SQAQVNWLDE LKILATDKRV CLGQAKELDK FRHLPSRACS SPLKLVACGR LSRQKGFDLL
IKAMVKLPAD RVSLTLAGEG EEASALNALA RPLPHVRLIG EVQDVARFLD SGDVVIIPSR
WEPFGLTCLE AIAAGKPVIL ANVDGLGDQV EWLKQKGGGY QLIDDLSVEG IERAINRVLD
AEPLRINCQQ RQSAEQAWQQ MLNSWQTVLE NQLQHRR