| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3433 |
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| Symbol | |
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| ID | 5663819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4198741 |
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| End bp | 4199619 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238089 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_001503281 |
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| Protein GI | 157963247 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.271229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTAT TTAAATTTGG TCTATCCCCA GACAAGTCTG CCACCATTCG CCGTGAGTTA
GGTCGTGATG CCGATGGCTA CTTTGAGGCG ATGCAGGTGG CCGAGAAAGC CTTTTTTAGC
TCGATTATCA CAGCGGATAA TCGACTCAAA CTCGACTGGT TACAGCTACG CACAGACTTG
AACACCCGTG TTGACGATAG AGAGTTATCT CGATTAAGAG ATTTCAATGT TGAGTTGACT
CAAAATGTGT CGGCCAAGCT GAACGGTCAG ATTCGGCAGG TTATCGTGGT CACGCCGGAT
TCTCTGACCG CGGCTGTTGC CGATATTGAG GCGCAAACTT GCATCGGCTT CGATACTGAG
ACCGCAGCAA CCTTTGAGAA GGGGCGGCGT AATCCTAATC CTATCTCGTT GATCCAAATT
GCGACGCCTA CACACAGCTA CCTGTTTCGT ATGCAGGGTG AGAATATCGT TCCGTTTATG
GCTGCATTAG CGCCAATTTT GAGTGGCGAT AAATTGCTGA AAGTGGGTAT AGGCCTTAGG
AGCGATCTTA ATGCCATGAA GCGAGACTTT GAGATAAGTG TTAACTCTAT GCTGGATCTT
AACTGGTTGA TGAACCAACT CGGTGCGCCC AAGCAACTGG GCACTCAACA GATGGCTGCC
ACTGTATTAG CCCTAAAGCT ACCCAAGAGT AAAAAGGTCA CCCTGTCTAA CTGGGCTAAA
CCGTTAGCCG AGCCCTTGAG TGAGCTTCAG TTACAATATG CTGCGGCCGA TGCCTTTGTG
GCGCTAGATA TTTTGTACGG ATTACTCGAG CAGTTAAGGC CCTATAGGGC GCTGTGGCCA
TTACCCTTGC AGCAACGCTT AACAGACTTG TTTGAGTAA
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| Protein sequence | MSLFKFGLSP DKSATIRREL GRDADGYFEA MQVAEKAFFS SIITADNRLK LDWLQLRTDL
NTRVDDRELS RLRDFNVELT QNVSAKLNGQ IRQVIVVTPD SLTAAVADIE AQTCIGFDTE
TAATFEKGRR NPNPISLIQI ATPTHSYLFR MQGENIVPFM AALAPILSGD KLLKVGIGLR
SDLNAMKRDF EISVNSMLDL NWLMNQLGAP KQLGTQQMAA TVLALKLPKS KKVTLSNWAK
PLAEPLSELQ LQYAAADAFV ALDILYGLLE QLRPYRALWP LPLQQRLTDL FE
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