Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3427 |
Symbol | |
ID | 5663813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4189078 |
End bp | 4190148 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641238083 |
Product | permease |
Protein accession | YP_001503275 |
Protein GI | 157963241 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000478015 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCCTG AAATCATGGC AATGGCCAAA GATACTGCCG GCATGTTTCT ATTTCTCGCG GCTGAATTAA CTCTGCTGTT TCTAGCGATT AGTTATATTG TCGGCATACT ACAAGAATAC ATTCCGCCTG AAAAAATCCA GTCGATTCTG AGTTCGAAGA AAGGCAAAGG CTATATTATT GCGGCCCTAC TCGGCGCTAT AACACCATTC TGCTCATGCT CAACGATTCC TTTCTTGAAA GGCTTATTAA GAGCTAAAGC AGGCTTCGGC CCTATGATGG TATTCCTGTT CTCTAGCCCG CTATTGAACC CAATTATCAT AGGCCTGTTT ATCGTGACCT TCGGTTTTAA AGTGGCACTG TTTTACTTCG CCGTTGCTAT GGTTGTTTCA GTCACTGCGG GTTATGTGCT GGAGAAACTA GGATTTGAGC GTTACGTTAA GCCTGAAGCT TATGAAGCAG CTGATAGCGC TAGTTGTGGT ACTAGCTGTG GCGATAGTGC AAAAGTAGAA GCGAAAGCTG AAACGAGTTG CTGCACTGCG CCAAATAAAG AAGTGGCTCC AATTGCGAAC ACAAGCTGCT GCTCAGCTCC TGCCGAACCA GTTAGCTGCT GTGGTACAGC AACAAGCACT TGTGGCTCAA CAGCAGTCGT AAAGGAAGAC AGCCGTTGGA TGCGTGTATG GCGAGCAACC TGGAAAGACT TTAAACAAGT TCTGCCTTAC TTAATGCTGG GTATTTTGCT TGGATCATTT ATCTATGGCT TTATACCAAC AGATCTAATC GCTAAATATG CGGGTGAAGG CACCTGGTAT GCGATCCCGA TTGCAGCTGT AATTGGTATC CCACTGTACA TTCGTGCAGA AGCGGTTATC CCATTAAGCT CAGCGTTAGT GGCTAAAGGT ATGGCGTTAG GTTCAGTTAT GGCACTGATT ATTGGTAGTG CGGGCGCAAG TTTAACGGAA GTGATCTTGC TGAAATCTAT CTTTAAGAAT CAGATGATTG CCGCATTCTT AGCTGTCATC TTAGGTATGG CGATTACTGC AGGTTATCTA TACACAGTTC TTTTTGCCTA A
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Protein sequence | MTPEIMAMAK DTAGMFLFLA AELTLLFLAI SYIVGILQEY IPPEKIQSIL SSKKGKGYII AALLGAITPF CSCSTIPFLK GLLRAKAGFG PMMVFLFSSP LLNPIIIGLF IVTFGFKVAL FYFAVAMVVS VTAGYVLEKL GFERYVKPEA YEAADSASCG TSCGDSAKVE AKAETSCCTA PNKEVAPIAN TSCCSAPAEP VSCCGTATST CGSTAVVKED SRWMRVWRAT WKDFKQVLPY LMLGILLGSF IYGFIPTDLI AKYAGEGTWY AIPIAAVIGI PLYIRAEAVI PLSSALVAKG MALGSVMALI IGSAGASLTE VILLKSIFKN QMIAAFLAVI LGMAITAGYL YTVLFA
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