Gene Spea_3427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3427 
Symbol 
ID5663813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4189078 
End bp4190148 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content45% 
IMG OID641238083 
Productpermease 
Protein accessionYP_001503275 
Protein GI157963241 
COG category[R] General function prediction only 
COG ID[COG0701] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000478015 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCTG AAATCATGGC AATGGCCAAA GATACTGCCG GCATGTTTCT ATTTCTCGCG 
GCTGAATTAA CTCTGCTGTT TCTAGCGATT AGTTATATTG TCGGCATACT ACAAGAATAC
ATTCCGCCTG AAAAAATCCA GTCGATTCTG AGTTCGAAGA AAGGCAAAGG CTATATTATT
GCGGCCCTAC TCGGCGCTAT AACACCATTC TGCTCATGCT CAACGATTCC TTTCTTGAAA
GGCTTATTAA GAGCTAAAGC AGGCTTCGGC CCTATGATGG TATTCCTGTT CTCTAGCCCG
CTATTGAACC CAATTATCAT AGGCCTGTTT ATCGTGACCT TCGGTTTTAA AGTGGCACTG
TTTTACTTCG CCGTTGCTAT GGTTGTTTCA GTCACTGCGG GTTATGTGCT GGAGAAACTA
GGATTTGAGC GTTACGTTAA GCCTGAAGCT TATGAAGCAG CTGATAGCGC TAGTTGTGGT
ACTAGCTGTG GCGATAGTGC AAAAGTAGAA GCGAAAGCTG AAACGAGTTG CTGCACTGCG
CCAAATAAAG AAGTGGCTCC AATTGCGAAC ACAAGCTGCT GCTCAGCTCC TGCCGAACCA
GTTAGCTGCT GTGGTACAGC AACAAGCACT TGTGGCTCAA CAGCAGTCGT AAAGGAAGAC
AGCCGTTGGA TGCGTGTATG GCGAGCAACC TGGAAAGACT TTAAACAAGT TCTGCCTTAC
TTAATGCTGG GTATTTTGCT TGGATCATTT ATCTATGGCT TTATACCAAC AGATCTAATC
GCTAAATATG CGGGTGAAGG CACCTGGTAT GCGATCCCGA TTGCAGCTGT AATTGGTATC
CCACTGTACA TTCGTGCAGA AGCGGTTATC CCATTAAGCT CAGCGTTAGT GGCTAAAGGT
ATGGCGTTAG GTTCAGTTAT GGCACTGATT ATTGGTAGTG CGGGCGCAAG TTTAACGGAA
GTGATCTTGC TGAAATCTAT CTTTAAGAAT CAGATGATTG CCGCATTCTT AGCTGTCATC
TTAGGTATGG CGATTACTGC AGGTTATCTA TACACAGTTC TTTTTGCCTA A
 
Protein sequence
MTPEIMAMAK DTAGMFLFLA AELTLLFLAI SYIVGILQEY IPPEKIQSIL SSKKGKGYII 
AALLGAITPF CSCSTIPFLK GLLRAKAGFG PMMVFLFSSP LLNPIIIGLF IVTFGFKVAL
FYFAVAMVVS VTAGYVLEKL GFERYVKPEA YEAADSASCG TSCGDSAKVE AKAETSCCTA
PNKEVAPIAN TSCCSAPAEP VSCCGTATST CGSTAVVKED SRWMRVWRAT WKDFKQVLPY
LMLGILLGSF IYGFIPTDLI AKYAGEGTWY AIPIAAVIGI PLYIRAEAVI PLSSALVAKG
MALGSVMALI IGSAGASLTE VILLKSIFKN QMIAAFLAVI LGMAITAGYL YTVLFA