| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3424 |
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| Symbol | |
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| ID | 5663810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4182920 |
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| End bp | 4185754 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641238080 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001503272 |
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| Protein GI | 157963238 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00012336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTCAA TAAGCCGTTT ATCTAAAGCA GTAAAGGTCG CGCTTTTAGC AACGACAAGT
GCAGCATTAA TGACAAGTGC CGGAGCCTAT GCTGAAGAGC AAGAGGGCGA TGGTATTGAA
AGAATCGAGG TGACAGGCTC GAAAATTAAG CGAATCGGTG AACTATCTCC AACTCCTGTA
ACTGTAATCA CAGGTGCAGA TATGATGGAT ATGGGTATCA CTAACGTGGC TGATATCTTG
AATAAACTTC CATCATCAAC AGTTGGTATC TCTCCAGAGA CTTCTAACAA CACTATTTTT
GCTAACGGTC TAAACCAAAC AAACCTACGT GGCTTAGGTA CCGACCGTAC GCTAGTTTTG
GTCAACGGTC GCCGTTTTGT TGCGGGCTCT AATGGTGACT CTGCTGTTGA CTTGAACACT
ATTCCAACGG CAATGGTTTC TCGAATTGAA GTGATTACTG GTGGTGCATC AGCGGTATAT
GGTTCTGATG CGATTGCAGG TGTTATTAAC ATTATCACTC GAACCGATGT TCAGGGTGTT
GAACTTGACG CGTCTTATAT TCAGCCTGAG CAAAGCGGTG GTGAAGAGAG TCAGTTCTCG
TTAACGGCGG GTGGTAACTT CTTAGATGAT AAATTGTCGA CTGTATTTAA CTTTACCTAT
GCAGAGCAGC AAGAGTTGCG CAATACCGAT AGAGACTTCT TAGATAATCC TGTCACAAGT
ATTTATAACC CTGATACTTC AGAAGGTGCG CCTGCACGTA TTCCTTATGA GGGTCGAAAG
CCACTGTCTT GGATCAACGA GGCGGGTACT TTCTTTGCTG GTGACGGCGG CCAATATACC
TTCGGCTCAG ATGGTGCCAT GAGAGAGTTT GATTATGGTG AAGGCCTAAT CCCAGGTCCA
GGTACTAACG GCAACTATTG TGGCCCAAGC TGTGAAGGTT ATGATCCAGT TGATTACGGT
TTAGTGCGTA CGCCGTTAGA GCGTATGGTA TTTACCTTAA ATACTGATTT CGAGATTAAT
GATAACCATA AGGTTTTCAC TGAAATTACT TATGTAGATT ACACATCTAA CGGTGAGAGC
ACGCCGGTAT TCCATACTTG GAATCCGATT ATGGCTGATA ATGCTTTTCT TCCACAAGAA
ACGCAGGACC TAATGGCTGA TACAGATATG GAATACTTCA ATCTTTATCG TATCGATGGT
GAGTTTGGTA ACCGTACTTA TAACCAAGAC CGTGAGACAA TGCGTTTCTT AGTCGGGCTT
GAAGGTTCAA TTAGCGATGA CTGGGATTAC TCTTTCCATG CTCAACGTGG TCAGTTAAAA
GAAACCACAT TATGGAAAGG CCAGATCTGG GATGAGCGTT ATGAGCAAGC AAAAGATGCC
ATCTTAGTTG ACGGTGAAAT CGTTTGTCGT GATACAGATG CACGTGCAGC AGGATGTGTA
CCAATGAACT TACTTGGTGT AAACCAAGCA AGTCAAGAGT CAATCGACTG GGTTGGCACT
AGTGCTGGCC AAACGGCTAA GACAACACAA ACAAGTGCTG GTTTAGTGGT TAGTGGTGCA
CTGTTTGATC TGCCTGCAGG TTATGTCAGT GCGGCATTCA GTGCCGACTA CCGTAAAGAA
GAGTCTGAAA CAAATCCAGA TCAAGCGCTA ATCGATGGTA CTATTTTTGG TAACAGCGCT
AACCCTATGA AGGGTGAGTA TGATGTTACT GAATTTGCAG CTGAATTTAA TGTTCCATTA
CTTTCTGATA TGTTCCTTGC CCACGATTTA GCTCTAGACT TAGCTTATCG CTGGATGGAT
TACAGCACAG CGGGTCAAGA TGATGCTTGG AAGGTCGGCC TAAACTGGGC GCCAATCGAA
GATCTTCGTC TACGTGCAAC GCGTTCAAAG TCAGTTCGAG CGCCAAATAT TGGTGAGCTA
TTTAGTCCTG CAGGCCAGAC ATTCGAAAGC TTCACCGATG TGTGTGACAA GATCAACGTT
GAACTAGGTC CAAATGACAA CCGTAAGAAA AACTGTCAAG CATCAGGCTT GCCAGAAGGT
TGGAACCCAT CAGATTCTTG GTACTTGAGT AACCATCCTG GAAGCAATGC AGGTAATCCA
GACCTAAAAG CTGAGACTTC AAACGATTAC ACTGTTGGTG CAGTTTATAC CCCTAGCTAC
CTAGATGGAT TCTCTATCAC AGTTGATTAC TGGGCATTTG AGATCTCTGA TGCGATTCAA
TACATAGGTG TCGATACAGC CGTACGTTAT TGCTATGACT CTGAGTCATT AGATAATGTC
TATTGTGATC GATTTACTCG TGATCCAGTA TCAGGAGATA TCGTCGATTT CGTACAGAGC
CCTGTAAACT CAGCATCGTT TGATGTGAAA GGTCTAGATA TCGAAGGTCA GTACGATATT
CCAACTGATA GCTTTGGTGA CTTCCGCGTT CATGTTATTG CTACTTACTT AGAGCAATGG
CAAACCAACC CAACAGGCTT TGCTGAAGAC TTACAAGTTG ATGTGGGTGA GTACACAGAT
CCACGTTGGA AGGCGATGTT TAGCTTAGGC TGGAAGTATG ACGCACTAAG TTTAGAAGCA
AGATCGAACT ACCGTCATTC AGCCGTTGCT AGCAACGACT GGAAGCCAGA GAACAACAAC
TATAACGATA TTCCATCGCA TACAGTTTGG GACTTCACTG GTTCTTATGC CTTTAATGAT
GATCTATCTT TACGCTTCGG TGTCTTGAAT GCCTTTGATA TTGAGCCACC ACGTAACCCA
TATGTTTACG ATGGCGCAGG GTACTATGAC ACCACGGGTC GTGCATTCTT CCTAGGTGCA
AACTATAAGC TTTAA
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| Protein sequence | MTSISRLSKA VKVALLATTS AALMTSAGAY AEEQEGDGIE RIEVTGSKIK RIGELSPTPV
TVITGADMMD MGITNVADIL NKLPSSTVGI SPETSNNTIF ANGLNQTNLR GLGTDRTLVL
VNGRRFVAGS NGDSAVDLNT IPTAMVSRIE VITGGASAVY GSDAIAGVIN IITRTDVQGV
ELDASYIQPE QSGGEESQFS LTAGGNFLDD KLSTVFNFTY AEQQELRNTD RDFLDNPVTS
IYNPDTSEGA PARIPYEGRK PLSWINEAGT FFAGDGGQYT FGSDGAMREF DYGEGLIPGP
GTNGNYCGPS CEGYDPVDYG LVRTPLERMV FTLNTDFEIN DNHKVFTEIT YVDYTSNGES
TPVFHTWNPI MADNAFLPQE TQDLMADTDM EYFNLYRIDG EFGNRTYNQD RETMRFLVGL
EGSISDDWDY SFHAQRGQLK ETTLWKGQIW DERYEQAKDA ILVDGEIVCR DTDARAAGCV
PMNLLGVNQA SQESIDWVGT SAGQTAKTTQ TSAGLVVSGA LFDLPAGYVS AAFSADYRKE
ESETNPDQAL IDGTIFGNSA NPMKGEYDVT EFAAEFNVPL LSDMFLAHDL ALDLAYRWMD
YSTAGQDDAW KVGLNWAPIE DLRLRATRSK SVRAPNIGEL FSPAGQTFES FTDVCDKINV
ELGPNDNRKK NCQASGLPEG WNPSDSWYLS NHPGSNAGNP DLKAETSNDY TVGAVYTPSY
LDGFSITVDY WAFEISDAIQ YIGVDTAVRY CYDSESLDNV YCDRFTRDPV SGDIVDFVQS
PVNSASFDVK GLDIEGQYDI PTDSFGDFRV HVIATYLEQW QTNPTGFAED LQVDVGEYTD
PRWKAMFSLG WKYDALSLEA RSNYRHSAVA SNDWKPENNN YNDIPSHTVW DFTGSYAFND
DLSLRFGVLN AFDIEPPRNP YVYDGAGYYD TTGRAFFLGA NYKL
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