| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3412 |
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| Symbol | |
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| ID | 5663798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4171620 |
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| End bp | 4172660 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641238068 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001503260 |
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| Protein GI | 157963226 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA TAGAGTTAAA TAGTACCTAC AACTTAAGGA GGGTCGTGTT AATTGGCATG
TGCACGCTTT TAGGCTGCCT GAGTTTTCTA CTCGGTATTA TCAACCTCTC AATCGCTGCA
AAGTGGATAA CACTTGGTTT TATCGAACTA TTCTACGCAC TGTGTTCATT CACACTGGCG
GTACTAGCAG TCAAAAGAAG ACACCAATTT TGGCAAGTTA TCCTGTATAT TTTTGCCTTA
ACCGTTATCG TCATTTACGC CGTATCTCTC TCAAAAACCA TAGGTTCAAT GATCTGCTGG
GTACTGGTTT TACCCACGGT TTACTATCTT CTTTTAGGTA AGAAGTTTGC GAATTTACCG
GTAATTATTC TTTTCTCTGC AGTAGTTGCA GACATCATTG GTAAATATGG TTTTACCGTT
AATCCGCTGC TAGTTAATTT CATTTTTAGT TATTTGCTTA TTTGGGCTGT TTCTCATATT
TACGAGAAAA ACCGCGCAAA TTCAGAAGCT AAATTACAAA AGCTCGCACT GCAAGATCCA
CTGACATTAA GCTATAACCG ACTAGCGCTA ACCAAGTATT TTGAGAATGT GGGTTCAAAG
CCGTCTCTGC AAGAGCTTGA CGAAGAGCTG CATCTACTGA TCTTAGATAT CGATTTCTTT
AAACAGGTAA ACGATGAGTA TGGTCATGAG GCAGGGGATA CGGTTCTACA AGAGTGCGCA
AAAATTATCA GTCGCATTGC CGGTGATAAA CAGACATTTA GGATCGGTGG TGAAGAATTT
TGCGTAATGA TTGAAAACAA AAAACAAGAT GAAGCGATAG CACTTGCCCA GTTAATTAGA
ACAAAACTGG CTCAACATAC TTTTAGACTC GCAGAGCAAG ACAATATCAA TATCACCGTC
AGCATTGGGC TTAGCAATTA TCAACCAGGT ATGGCGTTAC CAAGTCTATT ACGCCAAGCA
GATCAGCGGT TATATCGCGC TAAACACACA GGTCGAAACC AAGTGATTTA CCACAACGCA
CCACTTGCGG CTTCGGCATA A
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| Protein sequence | MKNIELNSTY NLRRVVLIGM CTLLGCLSFL LGIINLSIAA KWITLGFIEL FYALCSFTLA
VLAVKRRHQF WQVILYIFAL TVIVIYAVSL SKTIGSMICW VLVLPTVYYL LLGKKFANLP
VIILFSAVVA DIIGKYGFTV NPLLVNFIFS YLLIWAVSHI YEKNRANSEA KLQKLALQDP
LTLSYNRLAL TKYFENVGSK PSLQELDEEL HLLILDIDFF KQVNDEYGHE AGDTVLQECA
KIISRIAGDK QTFRIGGEEF CVMIENKKQD EAIALAQLIR TKLAQHTFRL AEQDNINITV
SIGLSNYQPG MALPSLLRQA DQRLYRAKHT GRNQVIYHNA PLAASA
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