Gene Spea_3402 details

Gene Information

• Locus tag: Spea_3402
• ID: 5663788
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 4156683
• End bp: 4157162
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641238058
• Product: YbaK/prolyl-tRNA synthetase associated region
• Protein accession: YP_001503250
• Protein GI: 157963216
• COG category: [S] Function unknown
• COG ID: [COG2606] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTATTT CAGCCCGATT AAATGAGTAT CTGAATGACA ATAATGTCGA CTACGAACTG 
GTTCCTCATC CTCACAGTTT TAGCTCATTA AGCTCAGCCA TTGCGGCTAA CATTTCCCCC 
GCGCAACTCG CAAAGGCGGT GATTTTAGAA GATCATGAGG GACGCAGAAT GATGGCAGTT 
CTCCCGGCCA ACCATAAGAT CAGCCTACGC AATCTAGGCG ATAAGCTTAA TCGCGATCTA 
CGCTTGATTG AAGAAAAAGA GGTCTATGAC ATGTTTAGCG ACTGCCACAA AGGTGCCATC 
CCATCACTAG GAGAGGTCTA CAACTTAGAA GCCGTTTATG ACGATCTGTT AGTCGAAGCC 
AAAGAGATCT ACATAGAGGC TGGCGACCAC AACACCTTAG TGCATCTGAG CCGCGAAGAC 
TTTGTTAAGC TGATTAAGGA TGCCAAGCAT TTGCATTTCA GCCACCAGAG CATTCATTAG 

 

Protein sequence

MSISARLNEY LNDNNVDYEL VPHPHSFSSL SSAIAANISP AQLAKAVILE DHEGRRMMAV 
LPANHKISLR NLGDKLNRDL RLIEEKEVYD MFSDCHKGAI PSLGEVYNLE AVYDDLLVEA 
KEIYIEAGDH NTLVHLSRED FVKLIKDAKH LHFSHQSIH