| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3398 |
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| Symbol | |
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| ID | 5663784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4152739 |
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| End bp | 4153419 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641238054 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001503246 |
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| Protein GI | 157963212 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGATG CAATTAACGC TTCACTGTTT ACCCCCATAG GCGAAGATGG CTTAATCGGA
ATTTACCTTA TTCTTAACGG CCTTAAAGTC ACCTTGATTG TGACCTTCTT CGCCATGATT
ATCGGTTCGA TTCTCGGTGT GGCGACCACC TTGATGAAGA TGTCATCTAA GTGGTATCTA
CGCTGGCCAG CGAATATTTA TGTCAGCATC ATTCGCGGTA CGCCAGTGGT TGTGCAGTTA
GTGATCCTTT ACTTCATCGT GCTGGCGGCA TTGGATGTCG ATAAGATCAC CGCTGCAGTT
ATCGCCTTTG GCCTTAATAG CGGCGCCTAT ATCTCAGAGA TCATTCGTGC GGGCATTCAG
GCCGTCGATA AAGGTCAAAT GGAGGCTGCT CGTTCATTAG GCTTGTCTCA CGGCCAAACA
ATGAAAGAGG TCATTCTGCC TCAGGCGATT AAAAATATTC TGCCATCGCT GGGTAACGAG
TTTATTGTGT TACTTAAAGA AACAGCCGTG ATTGGCTTTA TCGGTGGCGT GGACTTAATG
CGGGCTGGTG AAATCATCCG TAGCCGTACC TTTGAAGACA GTGTGCCATT ATTTACCTGT
GCGCTGATCT ACCTATTACT GACCTATATC TTCACCTTTA TGCTGTCTAG ATTTGAAACG
AGGTTAAAGC AAAGTGATTA A
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| Protein sequence | MIDAINASLF TPIGEDGLIG IYLILNGLKV TLIVTFFAMI IGSILGVATT LMKMSSKWYL
RWPANIYVSI IRGTPVVVQL VILYFIVLAA LDVDKITAAV IAFGLNSGAY ISEIIRAGIQ
AVDKGQMEAA RSLGLSHGQT MKEVILPQAI KNILPSLGNE FIVLLKETAV IGFIGGVDLM
RAGEIIRSRT FEDSVPLFTC ALIYLLLTYI FTFMLSRFET RLKQSD
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