Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3397 |
Symbol | |
ID | 5664823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4151994 |
End bp | 4152731 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641238053 |
Product | extracellular solute-binding protein |
Protein accession | YP_001503245 |
Protein GI | 157963211 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGT CAGTATTGGT TGTAGCAAGC TTAGGGTTAA CAGGCGCTTT AATGTTAACT GGCTGCGGTA AGAGTGATGA TGTACTTGTT GTAGGCACCA ATGCTTCATT CCCGCCATTT GAATATGTAG GCGGTGCTAG CGGCGATGAG ATAATGGGCT TCGATATCGA TTTAGCTAAG CAAATAGCAA AAGATGCCGG TAAAACCCTC AAAGTTGAAA ACATGAATTT TGACTCGCTG ATTGTTGCGC TCAATGCAGG CAAGGTCGAC TTTATCGCCT CGGGCATGAC TATTACCCCA GAGCGTCAGG CAAGCGTCGA TTTCTCAGAG CCTTACTATG AAGCCACTCA GATGGTGTTA GTCAATAAAG ATAACAACAG CATCAATAGT CTAGACGACC TTAAGGGTAA GCATATCGCG GTACAGCTAG GCTCAACCGG CGACATCATG GCCAAGAGCT ACAGCCAACA GGTTACCGCC TTCAACTCAG GCTTCGAAGC CGTGATGGAG CTAAAAAATG CCAAGGTTGA TTTGGTGTTG TTTGACAGCG AACCTGCCAT CAGCTTTTTA GAGAAGAATC CACAGCTAAA AATGGTTGAG CTGGATTTTT CACCTGAGTT TTATGGCTTT GCAGTGGCTA AGGACAAAGT TGAACTGCTA AACAGCATCA ACAGCAGCTT AAGCATCATG AAGCAAAACG GTGGCTATGA CGCCCTCGTT AACAAGCATA TGAAGTGA
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Protein sequence | MKKSVLVVAS LGLTGALMLT GCGKSDDVLV VGTNASFPPF EYVGGASGDE IMGFDIDLAK QIAKDAGKTL KVENMNFDSL IVALNAGKVD FIASGMTITP ERQASVDFSE PYYEATQMVL VNKDNNSINS LDDLKGKHIA VQLGSTGDIM AKSYSQQVTA FNSGFEAVME LKNAKVDLVL FDSEPAISFL EKNPQLKMVE LDFSPEFYGF AVAKDKVELL NSINSSLSIM KQNGGYDALV NKHMK
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