| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3390 |
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| Symbol | |
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| ID | 5663777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4143630 |
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| End bp | 4146215 |
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| Gene Length | 2586 bp |
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| Protein Length | 861 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641238047 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001503239 |
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| Protein GI | 157963205 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTGAAT TACAAGATAA ATTAACCCGA GTCGAGCAGG CCTCAGTTAA AACACTCATT
GAACAAGCGA GGCAGGTTAG CGAGGAGGCG CTAGGAGATA CGGAGGAGCA ACACCAAGTA
GAGCTAGTCA AAGCTTACAC TTTAGAACTA GAAGAGGTAC TGGATAAGAT AGATAAAACG
CGAATTATGT ATCAAAAAGT TGAGTCTGAG CAACGCAGTT TAGCGGATGA CCAACGCTTG
ATAAAAGATA ACTTAGCTTG GTTACGCGAT AGCACGGTTT TTGGTGCTTC CATCCGAGCA
CAGTTACAAA GGTTACCCTC CAAAATAGAC ACGCAATATA TTCCCGATGA AATTGCCAAA
GCCCACATTC GAAAATACGA AATAGGCCAA TTAAAAGATG ATGCTGAGCA ACCAAGTGCA
ACTTCTAGAG ATAAAAAAAA CGAAGAAGGT CCAGACAAGT TAGCCTCGTT ATTAAATAAA
TTATTAGACC AATTAACGAA AGATTATGAC AAGCTAATTT CAGCACTGAG TCAGCTAAAG
TTGGTCAAGG ATCAATATGC TCAAACAGTG GAGAAGGCAC GTAGTTTTTT AAAGCAGCAA
CAGCTATGGA CACGCAGTAA CGTGCCCATA TGGCAACACC TAACTGACTT CAATACTGTG
ACCTGGTTCG GCTCCAAGAC ACCAATTAAA AATATGTTAG ATGAGCTCCC ACAAGGACTG
TCTGTATCGC TGTTAACTGT ATTTGCTTTG TACACGATTC TTTTTATCTA TAGCACTAGT
CGGCTGAATC AATATGCCGC TCAGCGTAAG GATGAGCTTC AAAAAGTATT TGGTCACCCG
CTGAAAGATC GATTTCATAA TACTGTTTTG TTATTTTTAA TCGCCATTAT ACGCGCGCTT
ATTCTGCCTA TTTGGTATGT AATAACCGCT TGGGGACTGT ATTGGTTTTG GCCAGTTACG
ACCTCAAATG AGCTCAGTAC ACTGATCTTT GCCAGCGCAT CTGGCGTGTT TGTCGTCGAA
CTCATCCACG CCTTAAGCTA TAAACAAGGT GTTCTCGCAC TCCATCTAAA CTGGCCAGAG
CAAATTTGCT CATACCTACA TAAAGGAAGT CAACGGATAC TCTGGCCATT TGTCATTTTG
CTACTAAGTA TTTTTGCTGC AGAACTGGTT TCAGGGATCC ATGAAGCGGA AATATCTCGC
GTATTATTCC TATTACTAAT GGGAGTAATG ATGGCTGTCT TTATTTCACT GCTGAAAGAA
AAACATCTCC CCTCAACTTT ACCGTCCCCA CTTAATAGAG GCTTCTCCCT CTATCTATTT
CGTTTCATCG TTATCGGTTC GTTTATTACT ATTATCGTTA TGGCCGTTAT GGGGCTCTAT
ATTGCTTCAT GGATCTTACT TATCTATCAA CAGTTAACCA TTTACGTAGT GTTAGCAGTG
CTGTTTACCT ATCAAATGGG AGAACGCTGG CTAAAGATAG AGCATCGGCA GCTCAGCTAT
CAGCGGCTGC TAGCGCGGCG TGAAGAGCTC ATTGCTCAAC AACAAGAGCA AGCAGATGAG
TCACCCGAAA TTACTGAATT AAGGGAAACT ATTCCTGATG TAGAAGAGCG CAGTTTAGCG
AGTGAACAAG TTAGTGAACA GTCACTAACA CTGTTGCGTG GCTTGTCCTT AATTGGCTTA
GTGGCTGCAG TGTTAACCTT ATGGTCAAGC GCCTTAGAAA TGACCAGTTG GTTAGATGCC
ATTGTGGTGT GGCAAGTAAA TGAAATGACT CAAACCGGCG TAACCCTGGT GGATGTGACT
CTGCAATCAT TGATTTATGC AGTGGTCACA TTAATCGTAA CCTTTGTTGG TGTACGAAAC
TTACCAGGTA TTTTGGAACT GTTAATCCTG CGTCGTCTCG ACTTAGCGCC TGGCGCCGGC
TATGCGGTTA CCACTCTATT GCGCTATGTA ATTTTAATGG CAGGCTTAAT GGGTGCGTTT
TCCATATTAG GCTTTCAATG GTCTAAACTG CAATGGCTAG TTGCCGCATT CGGTGTAGGC
TTAGGATTTG GCTTACAAGA AATTTTCGCC AACTTTATTT CCGGTTTAAT TTTACTGTTT
GAACGACCTA TCCGTATTGG GGACATTGTT ACGATTAATG ATTTATCGGG AACGGTGAGC
AAAATTCAAA CACGCGCCAC CACCATTATT GATTGGGACA ACAAAGAAAT CGTGGTGCCC
AATAAAACCT TTATTACAGA AAAGCTCATT AACTGGTCGC TAACTAGCCC TATTACCAGA
ATCGTGATCC CTATTGGTGT CGCTTATGGT TCTGATATTG ATAAGGTGGA GAGCTTACTG
TATCAAATCG CGGATGAGCA CCCACTCGTA CTACCTGATC CGCAACCTTC TGTGGTGTTC
TTATCTTTTG GAGCTAGCAG TCTCGACTTT GAATTAAGAG CCCATATCAC TGCGATTGAA
CTACGCCTAT CAACGGTTCA TATCATCAAC AAAAATATTA ATCGCTTGTT TCGAGAACAC
GAGATTGAAA TTGCCTTTCC GCAAATGGAT GTGCATGTTC GTGATTTGCC GCCAAAAGAT
ACATGA
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| Protein sequence | MIELQDKLTR VEQASVKTLI EQARQVSEEA LGDTEEQHQV ELVKAYTLEL EEVLDKIDKT
RIMYQKVESE QRSLADDQRL IKDNLAWLRD STVFGASIRA QLQRLPSKID TQYIPDEIAK
AHIRKYEIGQ LKDDAEQPSA TSRDKKNEEG PDKLASLLNK LLDQLTKDYD KLISALSQLK
LVKDQYAQTV EKARSFLKQQ QLWTRSNVPI WQHLTDFNTV TWFGSKTPIK NMLDELPQGL
SVSLLTVFAL YTILFIYSTS RLNQYAAQRK DELQKVFGHP LKDRFHNTVL LFLIAIIRAL
ILPIWYVITA WGLYWFWPVT TSNELSTLIF ASASGVFVVE LIHALSYKQG VLALHLNWPE
QICSYLHKGS QRILWPFVIL LLSIFAAELV SGIHEAEISR VLFLLLMGVM MAVFISLLKE
KHLPSTLPSP LNRGFSLYLF RFIVIGSFIT IIVMAVMGLY IASWILLIYQ QLTIYVVLAV
LFTYQMGERW LKIEHRQLSY QRLLARREEL IAQQQEQADE SPEITELRET IPDVEERSLA
SEQVSEQSLT LLRGLSLIGL VAAVLTLWSS ALEMTSWLDA IVVWQVNEMT QTGVTLVDVT
LQSLIYAVVT LIVTFVGVRN LPGILELLIL RRLDLAPGAG YAVTTLLRYV ILMAGLMGAF
SILGFQWSKL QWLVAAFGVG LGFGLQEIFA NFISGLILLF ERPIRIGDIV TINDLSGTVS
KIQTRATTII DWDNKEIVVP NKTFITEKLI NWSLTSPITR IVIPIGVAYG SDIDKVESLL
YQIADEHPLV LPDPQPSVVF LSFGASSLDF ELRAHITAIE LRLSTVHIIN KNINRLFREH
EIEIAFPQMD VHVRDLPPKD T
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