| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3380 |
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| Symbol | cobT |
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| ID | 5663767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4128090 |
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| End bp | 4129121 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641238037 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_001503229 |
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| Protein GI | 157963195 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTTTG ATATTAAAGC TGTAAATACT GAATTTGATG ATGAAATTCA GCAAAAAATA
GACACTAAAA CTAAGCCCCT AGGCGCGCTG GGTGAGCTAG AACCGTTGGC TCTGCAAATA
GCCCAAGTGC TGGGCAAAGA TAAGCCACAG ATCAGCAAGC CAAAGATGAT GGTATTTGCA
GCCGACCATG GCATTGCACA GTCGGGGGTA TCCATAGCCC CGAGTGAGGT GACCACACAG
ATGGTGGTTA ACTTTATCAA TGGTGGTGCG GCCATTAACG TGTTTACCCG TCAGGTTGGC
TTCGACTTGG AAGTGATCGA CTGCGGGATA TTAAAGCCAA TTGAAAACTT AGAAGGGGTG
ATCGACCAAC GTTTAGGCTC AGGCACTGGC CCTATTCATA AGCGTGCAGC CATGACGCTC
GGCGCGGTGA AGCAAGGCTT TAAGATGGCG ACCACGCGAG TGGAGATGCA TCATCAAAAC
GGCTGTAACT TAATAGCCTT AGGCGAGATG GGGATTGGCA ATACGTCGTC GGCAGCCGCG
ATAATGTCGG CCTTAACAGG CTGTAAGGTG GAAGATTGTG TAGGCCGCGG CACCGGTATC
GATGCGGCGA CCTATAAGCG TAAGAAGATG CTCGTTGAGC AAGCGCTGCT TGTACATCAT
AGCGAGCTTG ATGACCCTAT GCAGGTACTT GCCTGTGTCG GCGGCTTTGA GATAGTGCAG
ATGACGGGCG CAATGCTAGC CGCAGCTGAG CGTAACATGC TTGTGATTGT CGATGGCTTT
ATTGCCAGCG CGGCAGCATT AGCGGCGGTA AAGATTAATC CAAATGTACG TGATTATATG
ATTTTCGCCC ACCAGTCTGA TGAGAAAGGC CATGTTCTGA TGCTGGAGTT TCTGCAGGCT
AGGCCACTAT TAAAGCTTGG CATGAAACTC GGCGAAGGCA CTGGCGCTGC ATTAGCGTTA
CCCCTAATCC AAGCTGCGGC AAATTTTTAT AACGAGATGG CCAGCTTCGA AGATGTCGGG
ATAGAGATTT AA
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| Protein sequence | MMFDIKAVNT EFDDEIQQKI DTKTKPLGAL GELEPLALQI AQVLGKDKPQ ISKPKMMVFA
ADHGIAQSGV SIAPSEVTTQ MVVNFINGGA AINVFTRQVG FDLEVIDCGI LKPIENLEGV
IDQRLGSGTG PIHKRAAMTL GAVKQGFKMA TTRVEMHHQN GCNLIALGEM GIGNTSSAAA
IMSALTGCKV EDCVGRGTGI DAATYKRKKM LVEQALLVHH SELDDPMQVL ACVGGFEIVQ
MTGAMLAAAE RNMLVIVDGF IASAAALAAV KINPNVRDYM IFAHQSDEKG HVLMLEFLQA
RPLLKLGMKL GEGTGAALAL PLIQAAANFY NEMASFEDVG IEI
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