Gene Spea_3379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3379 
Symbol 
ID5663766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4126933 
End bp4127712 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content51% 
IMG OID641238036 
Productcobalamin 5'-phosphate synthase 
Protein accessionYP_001503228 
Protein GI157963194 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0368] Cobalamin-5-phosphate synthase 
TIGRFAM ID[TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCTT GGCAACAACA GCTCAATCTT TTCTTTATCG CTATGGGGTT CTTTACGCGG 
ATCCCTATGC CGAAATGGAT TGAGGTCGAT GCAGATAAAC TGAATAAGGC GAGCCGCTAC
TTTGGTCTCG TTGGCTTATT GGTCGGTGCC ATTAGTGCGC TGGTTTACAC CTTAATGTTG
TATTGGGTAT CTCCCTCTAT CGCCATTGTG CTGGCGATGA TCACTAGCGT GCTAGTCACG
GGGGGCTTTC ATGAAGACGG CCTTGCCGAT ACCGCCGATG GATTAGGTGG CGGCTGGACG
GTTGAAGCCA AGCTTAACAT CATGAAAGAC TCTCGCCTTG GCAGTTATGG TGCGCTGGCT
TTGGTGCTGG CACTGCTACT CAAGTGGCAA CTACTAACAG AGCTTGCGCT GTTTGACCCA
AGCAGTGTCA GCCTTGCACT GATTGTCGGC CACTGTTTGA GTAGAGTGGT AGCTGCGAGC
TTTATCTTCT CCGAGCCCTA TGTCAGTGAC TCTGATACCA GCAAGAGCAA GCCACTTGCG
CAAGAGCAGG GCATCAATGA GCTATCTATC TTGCTGGCAA CTGGCATATT GGCGCTGTTG
TTAGTGGGGG TTATGCAAGC CTTAGTGTTA ACGCTTGCTC TTACCATAGT ACGCTACGGT
TTTGTCAGAC TGTTTACAAA GCAGATTGGC GGTTATACCG GTGATACGCT CGGCGCGGCC
CAGCAAGGCT CTGAGCTGAC CTGTTATCTG CTATTGCTTG TATTAGGAGT GAGCTGGTGA
 
Protein sequence
MQAWQQQLNL FFIAMGFFTR IPMPKWIEVD ADKLNKASRY FGLVGLLVGA ISALVYTLML 
YWVSPSIAIV LAMITSVLVT GGFHEDGLAD TADGLGGGWT VEAKLNIMKD SRLGSYGALA
LVLALLLKWQ LLTELALFDP SSVSLALIVG HCLSRVVAAS FIFSEPYVSD SDTSKSKPLA
QEQGINELSI LLATGILALL LVGVMQALVL TLALTIVRYG FVRLFTKQIG GYTGDTLGAA
QQGSELTCYL LLLVLGVSW