| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3343 |
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| Symbol | |
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| ID | 5663731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4084665 |
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| End bp | 4087157 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641238001 |
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| Product | trimethylamine-N-oxide reductase TorA |
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| Protein accession | YP_001503193 |
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| Protein GI | 157963159 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02164] trimethylamine-N-oxide reductase TorA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.922902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGAA GAGACTTTCT AAAAGGCTTA GTTGGAACAT CTTATGTCGT ACTTAGCGGT
TCATCAGTAC TTGCACCGCT AAACGCTTTA GCGGCATCAG GAGCTGATGC GTCAGACGGT
TGGCTTACAA CTGGTTCGCA CATGGGTGCG TTCAAGATGA AGCGTAAAAA CGGCGTGATC
TCTGAAGTTA AGCCTTTCGA TACCGATATG TATCCAACAG ATATGATCAA CGGTATTAAG
GGCTTAGTTT ACAACCCATC ACGCGTTCGC TACCCAATGG TTCGCTTAGA CTTTTTATTG
AAAGGTCACC AAAGCGATAC CACACAACGC GGTGACTTCC GCTTTGTACG TGTGACTTGG
GACAAGGCGC TCGGTTTATT TAAAGACTCA CTCGATCTTA TTCAAACTAA ATATGGTCCA
TCGGGACTAC ACGCGGGGCA AACAGGTTGG CGTGCAACGG GTCAGTTGCA TTCAAGCACC
AGCCATATGC AACGCGCTGT GGGCATGCAT GGTAACTTCG TTAAGAAGAT TGGTGACTAT
TCAACAGGTG CAGGGCAAAC CATTTTGCCT TACATCTTAG GTTCTACCGA AGTTTACGCT
CAAGGTACCT CTTGGTCGTT AATTCTGGAA CATTCTAAAA CCATCATTTT ATGGTCGAAT
GATCCATACA AGAACCTACA GGTCGGCTGG AACGCTGAAA CACATGAGTC TTATGCTTAC
CTTGCTCAAT TAAAAGAGAA AGTAGCCAAA GGCGAAATTC GTGTGATCAG TATCGATCCT
GTCGTCACGA AAACACAGCA ATACCTAGGT TGTGAGCAAC TTTACATTAA TCCGCAAACC
GACGTAGCGT TAATGCTCGG TATTGCTCAC GAAATGGTAG ACAAGAACCT TCACGATAAT
GCGTTTATCG AAGGTTATAG CTTAGGCTTC GATCAGTTCT TACCTTACAT TAAAGGCGAA
ACTGACGGTG TTGAGAAAAC ACCTGAGTGG GCAGCGGAGA TCACAGGCGT TTCAGCCGAG
ATCATCCGTG ATCTTGCTAA GGTAATGACA AAAGATCGCA CCCAGATGTT GATGGGCTGG
TGTATTCAGC GTCAACAACA TGGTGAGCAG CCTTATTGGA TGGCAGCGGT ACTTGCAACC
ATGATTGGCC AAATTGGTCT TCCGGGCGGC GGCATTAGTT ATGGTCACCA CTACTCAAGT
ATTGGTGTTC CGTCTTCGGG TGCGGCAGCG CCAGGTGCGT TCCCACGTAA CTTAGATGAT
GGTCAGAAGC CAATTTTTGA TAGCACTGAT TTTAAAGGCG CGAGCAATAC GATTCCAGTT
GCTCGTTGGA TTGACTCAAT CCTAGAGCCA GGTAAAACCA TTGACTCAAA CGGCTCTAAA
GTTACCTATC CAGACATTAA GATGATGGTG TTCTCGGGCA ACAACCCATG GAACCATCAC
CAAGATCGTA ACCGCATGAA GAAAGCGTTC CATAAGCTTG AGTGCATCGT GTCGATTGAC
ATGAACTGGA CGGCGACTTG TCGTTTCTCT GACATAGTAC TACCAGCTTG TACGACGTTT
GAACGTAACG ATATCGATAT CTATGGCGCA TACGCAAACC GTGGTTTGCT TGCCATGCAG
AAGATGGTTG AACCGTTATT TGAGAGTCTT TCTGATTTCG AGATCTTTAC TCGTTTTGCT
GCACTACTTG GCAAAGAGAA AGAGTACACT CGCGGCATGA CCGAGCACGA TTGGTTAGTG
AAGCTTTACA ACGACTGTAA AGCAGCAAAC GCTGGCAAGT TCGAAATGCC TGAATTCGAA
GAGTTCTGGA AAGCGGGTTA TGTTTACTTC GGTGAAGGTG AGCCTTGGGT TCGTCACGCG
GCATTTAGAG ATGATCCAGA AATCAACCCA CTTGGAACAC CATCTGGTTT GATTGAGATC
TTCAGCCGTA AGATTGCCCA CTACGAATAC GATGACTGCC CTGGCCACCC TACTTGGATG
GAAAAAGCAG AACGTAGCCA TGGCGGCCCT GGCTCAGACA AGCACCCAAT TTGGCTGCAG
TCTTGCCACC CAGATAAGCG TTTGCATTCA CAAATGTGTG AATCAGAAGA GTACCGTGAA
ACTTACACTG TACAAGGCCG TGAACCTGTA TACCTAAACC CTGAAGATGC TAAGAAACGC
GGCATTAAAT CAGGCGATGT GGTACGCGTG TTTAATGACC GTGGTCAGTT GCTTGCTGGT
GCAGTGGTAT CGGATAAGTT CCCTAAAGGG GTTATCCGTA TTCAAGAGGG TGCTTGGTAT
GGCCCAGTTG GTAAAGACGG TAGCAAAGAG GGCGGCGCAG AAATTGGTGC TATCTGTAGT
TATGGCGATC CAAACACTCT AACGCTAGAT ATCGGTACCT CTAAGCTTGC ACAAGCTTGC
TCGGCTTATA CCTGCCTTGT TGACTACGAA AAGTATCAAG GTAAAGTACC AGCAGTAAGT
TCATTTAGCG GCCCGGTTGA GATTGCATTA TGA
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| Protein sequence | MNRRDFLKGL VGTSYVVLSG SSVLAPLNAL AASGADASDG WLTTGSHMGA FKMKRKNGVI
SEVKPFDTDM YPTDMINGIK GLVYNPSRVR YPMVRLDFLL KGHQSDTTQR GDFRFVRVTW
DKALGLFKDS LDLIQTKYGP SGLHAGQTGW RATGQLHSST SHMQRAVGMH GNFVKKIGDY
STGAGQTILP YILGSTEVYA QGTSWSLILE HSKTIILWSN DPYKNLQVGW NAETHESYAY
LAQLKEKVAK GEIRVISIDP VVTKTQQYLG CEQLYINPQT DVALMLGIAH EMVDKNLHDN
AFIEGYSLGF DQFLPYIKGE TDGVEKTPEW AAEITGVSAE IIRDLAKVMT KDRTQMLMGW
CIQRQQHGEQ PYWMAAVLAT MIGQIGLPGG GISYGHHYSS IGVPSSGAAA PGAFPRNLDD
GQKPIFDSTD FKGASNTIPV ARWIDSILEP GKTIDSNGSK VTYPDIKMMV FSGNNPWNHH
QDRNRMKKAF HKLECIVSID MNWTATCRFS DIVLPACTTF ERNDIDIYGA YANRGLLAMQ
KMVEPLFESL SDFEIFTRFA ALLGKEKEYT RGMTEHDWLV KLYNDCKAAN AGKFEMPEFE
EFWKAGYVYF GEGEPWVRHA AFRDDPEINP LGTPSGLIEI FSRKIAHYEY DDCPGHPTWM
EKAERSHGGP GSDKHPIWLQ SCHPDKRLHS QMCESEEYRE TYTVQGREPV YLNPEDAKKR
GIKSGDVVRV FNDRGQLLAG AVVSDKFPKG VIRIQEGAWY GPVGKDGSKE GGAEIGAICS
YGDPNTLTLD IGTSKLAQAC SAYTCLVDYE KYQGKVPAVS SFSGPVEIAL
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