Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3342 |
Symbol | |
ID | 5663730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4083472 |
End bp | 4084650 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641238000 |
Product | trimethylamine-N-oxide reductase c-type cytochrome TorC |
Protein accession | YP_001503192 |
Protein GI | 157963158 |
COG category | [C] Energy production and conversion |
COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
TIGRFAM ID | [TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.688416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATGGT TACTTAACAT CTGGCGCACA CTGACTAAAC CAGCTAAATA CCTAACCTTA GGAAGTATTG GTATTTCTGC CTTTCTAATG GGAATTATCT TCTGGGGTGG CTTTAACACT GCACTTGAAG CAACGAATAC AGAAGAGTTC TGTATCAGCT GTCACAGTAT GGAAAGCAAG CCTTACCAAG AGCTCCAACA GACTGTACAT TTTTCAAACC ATTCAGGTGT GCGTGCAACT TGCCCAGACT GTCACGTACC GCATAACTAT GGCCGTAAGA TAGCGCGTAA GTTAGAAGCT TCTCACGACG TATACGGTTG GTTGTTTAAC ACCGTCAATA CACCTGAGAA GTTTGAAGCT AAGCGTCTTG AAATGGCAAG CCGTGAGTGG AAACGTTTTG ACCGTGATAA GTCTGCAGCA TGTAAAAACT GTCACCAGTA CGACTCTATG AAGTGGGACA GCATGTCTAA GCTTGCAGTT AAGCAAATGA AGCGCGCTGC TGAGTTAGAT CAAAGCTGTG TGGATTGCCA CAAAGGTATT GCTCACAAGC TACCAGAAAT GGGTACCGCT CGTGCTCCAG AGTTGATTGC CGAAGTGGGT CGTGGCGTAA GTGGTGTTCA AGTGGGTCAA ACTTACTTCA CAGCATTAAC CAAGCCATTA TTCTTCAACG ATAAAACTGA CGTTGAAGCC GGCACATTAA ACATTGCGAC TAAGGTGAAA ATCTTAGAAG TAAAAGGTAA CCGTGCCAAG ATTGGTATCG ATGGCTGGAG AAAGAAAATC GGTGCAGGCC GCGTGATCTA CTATGACTTT GGCTTAAACA TTCTTTCGGC TCAGTTAACT AAAGACGCTG CGCTAGAAGA AGGTGTGATT AAGACATTCG AAGAGAAAGA AGATCCAATG ACAGGCCTTA AGTGGCAGCG TGTAGAAGCG GACATTTGGA CGGAAACTGA CTACTTGCTA ACGGATCTAC AACCACTATG GGATTACGCT CGTAGTACAT ACAGCACAGC ATGTAGCGTA TGTCACACCC AGCCAGCTGA AGCACACTTT GACGCCAACA CATGGCCAGG TATGTTCCAA GGCATGATCG CATTCGTCAA CATGGATCAA GATACCCAAG CTTTGGTACA GAAATATTTA CAAGAGCATT CATCAACTTT CGATAAGTCG GCTCACTAA
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Protein sequence | MRWLLNIWRT LTKPAKYLTL GSIGISAFLM GIIFWGGFNT ALEATNTEEF CISCHSMESK PYQELQQTVH FSNHSGVRAT CPDCHVPHNY GRKIARKLEA SHDVYGWLFN TVNTPEKFEA KRLEMASREW KRFDRDKSAA CKNCHQYDSM KWDSMSKLAV KQMKRAAELD QSCVDCHKGI AHKLPEMGTA RAPELIAEVG RGVSGVQVGQ TYFTALTKPL FFNDKTDVEA GTLNIATKVK ILEVKGNRAK IGIDGWRKKI GAGRVIYYDF GLNILSAQLT KDAALEEGVI KTFEEKEDPM TGLKWQRVEA DIWTETDYLL TDLQPLWDYA RSTYSTACSV CHTQPAEAHF DANTWPGMFQ GMIAFVNMDQ DTQALVQKYL QEHSSTFDKS AH
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